RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 TTC9BQ8N6N2 239 aa12.48□□□□□ -0.41
CSMD2-202ENST00000338325 FAM184AQ8NB25 1140 aa12.48□□□□□ -0.41
CSMD2-202ENST00000338325 ATAD1Q8NBU5 361 aa12.48□□□□□ -0.41
CSMD2-202ENST00000338325 BPIFB1Q8TDL5 484 aa12.48□□□□□ -0.41
CSMD2-202ENST00000338325 BICD1Q96G01 975 aa12.48□□□□□ -0.41
CSMD2-202ENST00000338325 HSFX1Q9UBD0 423 aa12.48□□□□□ -0.41
CSMD2-202ENST00000338325 LIMCH1Q9UPQ0 1083 aa12.48□□□□□ -0.41
CSMD2-202ENST00000338325 USP24Q9UPU5 2620 aa12.48□□□□□ -0.41
CSMD2-202ENST00000338325 KIAA1549LQ6ZVL6 1849 aa12.48□□□□□ -0.41
CSMD2-202ENST00000338325 LACTBL1A8MY62 500 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 H0YCG3 227 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 SOAT2O75908 522 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 HOXC13P31276 330 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 NCKAP1LP55160 1127 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 CYP4F8P98187 520 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 CACNB1Q02641 598 aaPredicted RBP12.47□□□□□ -0.41
CSMD2-202ENST00000338325 TNK2Q07912 1038 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 SF3A2Q15428 464 aaKnown RBP12.47□□□□□ -0.41
CSMD2-202ENST00000338325 ZRSR1Q15695 479 aaKnown RBP12.47□□□□□ -0.41
CSMD2-202ENST00000338325 KYAT1Q16773 422 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 ITPRIPL2Q3MIP1 535 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 ARMCX5Q6P1M9 558 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 DTHD1Q6ZMT9 781 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 SYT2Q8N9I0 419 aaPredicted RBP12.47□□□□□ -0.41
CSMD2-202ENST00000338325 C12orf50Q8NA57 414 aaPredicted RBP12.47□□□□□ -0.41
CSMD2-202ENST00000338325 GAB3Q8WWW8 586 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 LOXL4Q96JB6 756 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 GCNAQ96QF7 691 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 TSPAN18Q96SJ8 248 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 TMEM209Q96SK2 561 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 ARRDC1-AS1Q9H2J1 176 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 TASP1Q9H6P5 420 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 KCND2Q9NZV8 630 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 SCN1AP35498 2009 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 ZFHX4Q86UP3 3567 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 MYO16Q9Y6X6 1858 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 PPEF2O14830 753 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 AXIN1O15169 862 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 EXTL3O43909 919 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 EPN2O95208 641 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 ZNF806P0C7X5 589 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 PAX3P23760 479 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 CDC25CP30307 473 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 MCM2P49736 904 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 LIG4P49917 911 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 VEPH1Q14D04 833 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 PTPAQ15257 358 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 ENOX2Q16206 610 aaKnown RBP12.47□□□□□ -0.41
CSMD2-202ENST00000338325 HYIQ5T013 277 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 SPATA1Q5VX52 437 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 KCTD17Q8N5Z5 321 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 SENP8Q96LD8 212 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 SEPT5Q99719 369 aaPredicted RBP12.47□□□□□ -0.41
CSMD2-202ENST00000338325 LPIN3Q9BQK8 851 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 RPF1Q9H9Y2 349 aaKnown RBP12.47□□□□□ -0.41
CSMD2-202ENST00000338325 THG1LQ9NWX6 298 aaKnown RBP12.47□□□□□ -0.41
CSMD2-202ENST00000338325 LARSQ9P2J5 1176 aaKnown RBP12.47□□□□□ -0.41
CSMD2-202ENST00000338325 ANGPTL2Q9UKU9 493 aa12.47□□□□□ -0.41
CSMD2-202ENST00000338325 ATG2BQ96BY7 2078 aa12.46□□□□□ -0.42
CSMD2-202ENST00000338325 CCDC163A0A0D9SF12 145 aa12.46□□□□□ -0.42
CSMD2-202ENST00000338325 HNRNPDLO14979 420 aaKnown RBP12.46□□□□□ -0.42
CSMD2-202ENST00000338325 OGTO15294 1046 aa12.46□□□□□ -0.42
CSMD2-202ENST00000338325 FAM189A1O60320 539 aa12.46□□□□□ -0.42
CSMD2-202ENST00000338325 EIF5BO60841 1220 aaKnown RBP12.46□□□□□ -0.42
CSMD2-202ENST00000338325 RPP40O75818 363 aaKnown RBP12.46□□□□□ -0.42
CSMD2-202ENST00000338325 CYP11A1P05108 521 aa12.46□□□□□ -0.42
CSMD2-202ENST00000338325 ADRB2P07550 413 aa12.46□□□□□ -0.42
CSMD2-202ENST00000338325 ATF6P18850 670 aa12.46□□□□□ -0.42
CSMD2-202ENST00000338325 PMLP29590 882 aa12.46□□□□□ -0.42
CSMD2-202ENST00000338325 RAP1GAPP47736 663 aa12.46□□□□□ -0.42
CSMD2-202ENST00000338325 TUFMP49411 452 aaKnown RBP12.46□□□□□ -0.42
CSMD2-202ENST00000338325 SLC12A3P55017 1021 aa12.46□□□□□ -0.42
CSMD2-202ENST00000338325 LILRA4P59901 499 aa12.46□□□□□ -0.42
CSMD2-202ENST00000338325 CCDC6Q16204 474 aa12.46□□□□□ -0.42
CSMD2-202ENST00000338325 SLC39A12Q504Y0 691 aa12.46□□□□□ -0.42
CSMD2-202ENST00000338325 PKN3Q6P5Z2 889 aa12.46□□□□□ -0.42
CSMD2-202ENST00000338325 CACNA2D4Q7Z3S7 1137 aa12.46□□□□□ -0.42
CSMD2-202ENST00000338325 OR10T2Q8NGX3 314 aa12.46□□□□□ -0.42
CSMD2-202ENST00000338325 KCNN1Q92952 543 aa12.46□□□□□ -0.42
CSMD2-202ENST00000338325 PNMA5Q96PV4 448 aa12.46□□□□□ -0.42
CSMD2-202ENST00000338325 IL21Q9HBE4 155 aa12.46□□□□□ -0.42
CSMD2-202ENST00000338325 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.46□□□□□ -0.42
CSMD2-202ENST00000338325 ATG13O75143 517 aa12.45□□□□□ -0.42
CSMD2-202ENST00000338325 PIGRP01833 764 aa12.45□□□□□ -0.42
CSMD2-202ENST00000338325 PLA2G4BP0C869 781 aa12.45□□□□□ -0.42
CSMD2-202ENST00000338325 CCDC192P0DO97 292 aa12.45□□□□□ -0.42
CSMD2-202ENST00000338325 PXNP49023 591 aaPredicted RBP12.45□□□□□ -0.42
CSMD2-202ENST00000338325 GRSF1Q12849 480 aaKnown RBP eCLIP12.45□□□□□ -0.42
CSMD2-202ENST00000338325 MGAT5BQ3V5L5 792 aa12.45□□□□□ -0.42
CSMD2-202ENST00000338325 TMEM196Q5HYL7 178 aa12.45□□□□□ -0.42
CSMD2-202ENST00000338325 N4BP2L1Q5TBK1 243 aaPredicted RBP12.45□□□□□ -0.42
CSMD2-202ENST00000338325 C9orf57Q5W0N0 161 aa12.45□□□□□ -0.42
CSMD2-202ENST00000338325 JADE1Q6IE81 842 aa12.45□□□□□ -0.42
CSMD2-202ENST00000338325 KBTBD6Q86V97 674 aa12.45□□□□□ -0.42
CSMD2-202ENST00000338325 FAM212AQ96EL1 285 aa12.45□□□□□ -0.42
CSMD2-202ENST00000338325 CDK5RAP3Q96JB5 506 aa12.45□□□□□ -0.42
CSMD2-202ENST00000338325 ZCWPW1Q9H0M4 648 aa12.45□□□□□ -0.42
CSMD2-202ENST00000338325 SMG9Q9H0W8 520 aaKnown RBP12.45□□□□□ -0.42
CSMD2-202ENST00000338325 ZMYM5Q9UJ78 669 aa12.45□□□□□ -0.42
CSMD2-202ENST00000338325 SLC8A2Q9UPR5 921 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms