RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 MMEP08473 750 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 STAG3L1P0CL83 205 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 GNAT1P11488 350 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 HOXC13P31276 330 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 RPL9P32969 192 aaKnown RBP5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 HSP90AA4PQ58FG1 418 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 FAM171BQ6P995 826 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 METTL13Q8N6R0 699 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 CMASQ8NFW8 434 aaPredicted RBP5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 VWCEQ96DN2 955 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 ZNF333Q96JL9 665 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 PARD6BQ9BYG5 372 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 TRMT1Q9NXH9 659 aaKnown RBP5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 ANKFY1Q9P2R3 1169 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 MAFFQ9ULX9 164 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 TRPV2Q9Y5S1 764 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 ATXN2Q99700 1313 aaKnown RBP5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 LACTBL1A8MY62 500 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 HHLA1C9JL84 531 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 ATF7P17544 494 aaPredicted RBP5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 KLRC2P26717 231 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 PDE6CP51160 858 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 MRPS6P82932 125 aaKnown RBP5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 PPFIA1Q13136 1202 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 PTK6Q13882 451 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 GPNMBQ14956 572 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 NOTUMQ6P988 496 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 ZNF449Q6P9G9 518 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 XYLT1Q86Y38 959 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 IQCKQ8N0W5 287 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 ARFGAP1Q8N6T3 406 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 CARD6Q9BX69 1037 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 RGS18Q9NS28 235 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 ADAMTS1Q9UHI8 967 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 CYTH4Q9UIA0 394 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 STRIP2Q9ULQ0 834 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 BARX2Q9UMQ3 279 aaPredicted RBP5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 NEU3Q9UQ49 428 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 RAD54BQ9Y620 910 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 SASH3O75995 380 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 PARNO95453 639 aaKnown RBP5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 MYCNP04198 464 aaPredicted RBP5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 PSMA3P25788 255 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 TMOD1P28289 359 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 CYP27A1Q02318 531 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 RAPGEF1Q13905 1077 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 KIAA0753Q2KHM9 967 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 CFAP221Q4G0U5 840 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 SCARA3Q6AZY7 606 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 ANKRD33Q7Z3H0 272 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 FAM228AQ86W67 206 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 SYCP3Q8IZU3 236 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 NOA1Q8NC60 698 aaKnown RBP5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 SAAL1Q96ER3 474 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 C1orf112Q9NSG2 853 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 OGDHLQ9ULD0 1010 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 PTPN22Q9Y2R2 807 aa5.72□□□□□ -1.49
PRPF4B-201ENST00000337659 DOCK4Q8N1I0 1966 aa5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 AGPSO00116 658 aa5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 PTGESO14684 152 aa5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 B4GALT5O43286 388 aa5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 HTR7P34969 479 aa5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 ZNF135P52742 658 aaPredicted RBP5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 SEMA3BQ13214 749 aa5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 FSCN1Q16658 493 aaKnown RBP5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 OTUD1Q5VV17 481 aaPredicted RBP5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 C9orf57Q5W0N0 161 aa5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 JADE1Q6IE81 842 aa5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 OLFML1Q6UWY5 402 aa5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 RNF149Q8NC42 400 aa5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 TMEM40Q8WWA1 233 aa5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 ALG3Q92685 438 aa5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 ART4Q93070 314 aa5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 NAP1L3Q99457 506 aaPredicted RBP5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 CELF4Q9BZC1 486 aaKnown RBP5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 GCOM2Q9BZD3 368 aaPredicted RBP5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 PDE11AQ9HCR9 933 aa5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 GRHL1Q9NZI5 618 aa5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 SRRDQ9UH36 339 aa5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 TRPC6Q9Y210 931 aa5.71□□□□□ -1.49
PRPF4B-201ENST00000337659 CTAGE15A4D2H0 777 aa5.71□□□□□ -1.5
PRPF4B-201ENST00000337659 SMAPO00193 183 aa5.71□□□□□ -1.5
PRPF4B-201ENST00000337659 NDC80O14777 642 aa5.71□□□□□ -1.5
PRPF4B-201ENST00000337659 MDM4O15151 490 aa5.71□□□□□ -1.5
PRPF4B-201ENST00000337659 FKTNO75072 461 aa5.71□□□□□ -1.5
PRPF4B-201ENST00000337659 PHF2O75151 1096 aa5.71□□□□□ -1.5
PRPF4B-201ENST00000337659 CHRNA1P02708 482 aa5.71□□□□□ -1.5
PRPF4B-201ENST00000337659 SSBP05455 408 aaKnown RBP eCLIP5.71□□□□□ -1.5
PRPF4B-201ENST00000337659 CTAGE8P0CG41 777 aa5.71□□□□□ -1.5
PRPF4B-201ENST00000337659 SKIP12755 728 aa5.71□□□□□ -1.5
PRPF4B-201ENST00000337659 SLC18A1P54219 525 aa5.71□□□□□ -1.5
PRPF4B-201ENST00000337659 PLCB3Q01970 1234 aa5.71□□□□□ -1.5
PRPF4B-201ENST00000337659 ZNF33AQ06730 810 aa5.71□□□□□ -1.5
PRPF4B-201ENST00000337659 RAD51AP2Q09MP3 1159 aa5.71□□□□□ -1.5
PRPF4B-201ENST00000337659 OASLQ15646 514 aaKnown RBP5.71□□□□□ -1.5
PRPF4B-201ENST00000337659 DCAF17Q5H9S7 520 aaPredicted RBP5.71□□□□□ -1.5
PRPF4B-201ENST00000337659 ZDHHC24Q6UX98 284 aa5.71□□□□□ -1.5
PRPF4B-201ENST00000337659 CTAGE6Q86UF2 777 aa5.71□□□□□ -1.5
PRPF4B-201ENST00000337659 TRIM50Q86XT4 487 aa5.71□□□□□ -1.5
PRPF4B-201ENST00000337659 CTAGE4Q8IX94 777 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms