RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 KAZNQ674X7 775 aa7.23□□□□□ -1.25
SF3B1-201ENST00000335508 IRF2BP1Q8IU81 584 aa7.23□□□□□ -1.25
SF3B1-201ENST00000335508 MRPS31Q92665 395 aaKnown RBP7.23□□□□□ -1.25
SF3B1-201ENST00000335508 PRDM5Q9NQX1 630 aaPredicted RBP7.23□□□□□ -1.25
SF3B1-201ENST00000335508 DMAC2Q9NW81 257 aa7.23□□□□□ -1.25
SF3B1-201ENST00000335508 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.23□□□□□ -1.25
SF3B1-201ENST00000335508 GIT1Q9Y2X7 761 aa7.23□□□□□ -1.25
SF3B1-201ENST00000335508 TACC3Q9Y6A5 838 aa7.23□□□□□ -1.25
SF3B1-201ENST00000335508 GOLGA8KD6RF30 607 aa7.23□□□□□ -1.25
SF3B1-201ENST00000335508 CPP00450 1065 aa7.23□□□□□ -1.25
SF3B1-201ENST00000335508 CYBBP04839 570 aa7.23□□□□□ -1.25
SF3B1-201ENST00000335508 ADORA2BP29275 332 aa7.23□□□□□ -1.25
SF3B1-201ENST00000335508 KPNA1P52294 538 aaPredicted RBP7.23□□□□□ -1.25
SF3B1-201ENST00000335508 EPHB1P54762 984 aa7.23□□□□□ -1.25
SF3B1-201ENST00000335508 SPIRE1Q08AE8 756 aa7.23□□□□□ -1.25
SF3B1-201ENST00000335508 CFAP157Q5JU67 520 aa7.23□□□□□ -1.25
SF3B1-201ENST00000335508 C11orf63Q6NUN7 778 aa7.23□□□□□ -1.25
SF3B1-201ENST00000335508 SPATS2Q86XZ4 545 aaKnown RBP7.23□□□□□ -1.25
SF3B1-201ENST00000335508 EFHBQ8N7U6 833 aa7.23□□□□□ -1.25
SF3B1-201ENST00000335508 HTATIP2Q9BUP3 242 aa7.23□□□□□ -1.25
SF3B1-201ENST00000335508 PARD6BQ9BYG5 372 aa7.23□□□□□ -1.25
SF3B1-201ENST00000335508 KCTD10Q9H3F6 313 aa7.23□□□□□ -1.25
SF3B1-201ENST00000335508 CNOT10Q9H9A5 744 aaKnown RBP7.23□□□□□ -1.25
SF3B1-201ENST00000335508 XAB2Q9HCS7 855 aaKnown RBP7.23□□□□□ -1.25
SF3B1-201ENST00000335508 ADAMTS5Q9UNA0 930 aa7.23□□□□□ -1.25
SF3B1-201ENST00000335508 SIK3Q9Y2K2 1263 aa7.23□□□□□ -1.25
SF3B1-201ENST00000335508 IRS2Q9Y4H2 1338 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 KPNA7A9QM74 516 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 GPR25O00155 361 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 NCAM2O15394 837 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 YWHAZP63104 245 aaKnown RBP7.22□□□□□ -1.25
SF3B1-201ENST00000335508 FSTL1Q12841 308 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 ILF2Q12905 390 aaKnown RBP7.22□□□□□ -1.25
SF3B1-201ENST00000335508 UAP1Q16222 522 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-201ENST00000335508 PTPN21Q16825 1174 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 PASD1Q8IV76 773 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 FAM49BQ9NUQ9 324 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 COL20A1Q9P218 1284 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 HDAC6Q9UBN7 1215 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 HPCAL4Q9UM19 191 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 ZNF536O15090 1300 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 DHX15O43143 795 aaKnown RBP7.22□□□□□ -1.25
SF3B1-201ENST00000335508 CDH16O75309 829 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 PIGRP01833 764 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 DNAJB2P25686 324 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 COPS2P61201 443 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 ADCY2Q08462 1091 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 BST2Q10589 180 aaKnown RBP7.22□□□□□ -1.25
SF3B1-201ENST00000335508 ACBD5Q5T8D3 534 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-201ENST00000335508 EEF1DP3Q658K8 133 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 C1orf228Q6PIY5 440 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 ADAT2Q7Z6V5 191 aaKnown RBP7.22□□□□□ -1.25
SF3B1-201ENST00000335508 CCNJLQ8IV13 435 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 ATP11CQ8NB49 1132 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 PYROXD1Q8WU10 500 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 TRAPPC12Q8WVT3 735 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 COPS5Q92905 334 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 TMEM176AQ96HP8 235 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 CYTH2Q99418 400 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 FBXO44Q9H4M3 255 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 TRPM5Q9NZQ8 1165 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 VPS18Q9P253 973 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 CLGNO14967 610 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 PJA2O43164 708 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 ARF4P18085 180 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-201ENST00000335508 RRM1P23921 792 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 CBX1P83916 185 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 ATP11AP98196 1134 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 DEUP1Q05D60 604 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 PDK2Q15119 407 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 CDO1Q16878 200 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 ASAP3Q8TDY4 903 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 EPS8L1Q8TE68 723 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 WDR24Q96S15 920 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 GAD1Q99259 594 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 FZD8Q9H461 694 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 STK39Q9UEW8 545 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 RPTORQ8N122 1335 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 SMIM23A6NLE4 172 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 PGK1P00558 417 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 ITIH2P19823 946 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 EDNRBP24530 442 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 CCT5P48643 541 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 PPP3CAQ08209 521 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 TBX2Q13207 712 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-201ENST00000335508 DNAJC21Q5F1R6 531 aaKnown RBP7.22□□□□□ -1.25
SF3B1-201ENST00000335508 ARSHQ5FYA8 562 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 LZTR1Q8N653 840 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 ADAM2Q99965 735 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 PIDD1Q9HB75 910 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 FAN1Q9Y2M0 1017 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 SNX24Q9Y343 169 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 AP1G2O75843 785 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 TROVE2P10155 538 aaKnown RBP eCLIP7.22□□□□□ -1.25
SF3B1-201ENST00000335508 HPDP32754 393 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-201ENST00000335508 IKBKEQ14164 716 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 ANO4Q32M45 955 aa7.22□□□□□ -1.25
SF3B1-201ENST00000335508 GKAP1Q5VSY0 366 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-201ENST00000335508 RNF219Q5W0B1 726 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-201ENST00000335508 CYP4F22Q6NT55 531 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms