RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 DHX34Q14147 1143 aaKnown RBP12.49□□□□□ -0.41
LIMK2-202ENST00000333611 RABGAP1LQ5R372 815 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 SLC47A2Q86VL8 602 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 TREML1Q86YW5 311 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 ZDHHC14Q8IZN3 488 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 EFCAB3Q8N7B9 438 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 DHX38Q92620 1227 aaKnown RBP12.49□□□□□ -0.41
LIMK2-202ENST00000333611 CADM1Q9BY67 442 aaKnown RBP12.49□□□□□ -0.41
LIMK2-202ENST00000333611 EPB41L4BQ9H329 900 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 C12orf65Q9H3J6 166 aaKnown RBP12.49□□□□□ -0.41
LIMK2-202ENST00000333611 GRHL1Q9NZI5 618 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 CCDC22O60826 627 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 NDUFB10O96000 172 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 SNHG28P0DPA3 235 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 VCAM1P19320 739 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 CHKAP35790 457 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 SPIRE1Q08AE8 756 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 BFSP1Q12934 665 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 HYIQ5T013 277 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 SYDE2Q5VT97 1194 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 TTC7AQ9ULT0 858 aaPredicted RBP12.48□□□□□ -0.41
LIMK2-202ENST00000333611 WDR37Q9Y2I8 494 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 A0A0A6YYK5 440 aaPredicted RBP12.48□□□□□ -0.41
LIMK2-202ENST00000333611 TMEM247A6NEH6 219 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 TTLL13PA6NNM8 815 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 SLC16A3O15427 465 aaKnown RBP12.48□□□□□ -0.41
LIMK2-202ENST00000333611 GJB6O95452 261 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 NELFEP18615 380 aaKnown RBP12.48□□□□□ -0.41
LIMK2-202ENST00000333611 COILP38432 576 aaPredicted RBP12.48□□□□□ -0.41
LIMK2-202ENST00000333611 RXRGP48443 463 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 SERPINB8P50452 374 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 NOP14P78316 857 aaKnown RBP12.48□□□□□ -0.41
LIMK2-202ENST00000333611 PLCB3Q01970 1234 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 CC2D2BQ6DHV5 1058 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 RHOT2Q8IXI1 618 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 RILPQ96NA2 401 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 GCNAQ96QF7 691 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 ZNF577Q9BSK1 485 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 MRPL1Q9BYD6 325 aaKnown RBP12.48□□□□□ -0.41
LIMK2-202ENST00000333611 RANBP17Q9H2T7 1088 aaKnown RBP12.48□□□□□ -0.41
LIMK2-202ENST00000333611 PCDH18Q9HCL0 1135 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.48□□□□□ -0.41
LIMK2-202ENST00000333611 MARCOQ9UEW3 520 aaPredicted RBP12.48□□□□□ -0.41
LIMK2-202ENST00000333611 ANAPC7Q9UJX3 599 aa12.48□□□□□ -0.41
LIMK2-202ENST00000333611 CD151P48509 253 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 ARFIP2P53365 341 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 OXCT1P55809 520 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 PSMC1P62191 440 aaKnown RBP12.47□□□□□ -0.41
LIMK2-202ENST00000333611 POU5F1Q01860 360 aaKnown RBP12.47□□□□□ -0.41
LIMK2-202ENST00000333611 PPATQ06203 517 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 PPP3CAQ08209 521 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 MTFR1Q15390 333 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 DPY19L2P1Q6NXN4 242 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 FAM136AQ96C01 138 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 CNBD2Q96M20 576 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 KIFC3Q9BVG8 833 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 ARL8BQ9NVJ2 186 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 MAFGO15525 162 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 CLPTM1O96005 669 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 GAP43P17677 238 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 MXI1P50539 228 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 GABPAQ06546 454 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 ASPHQ12797 758 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 ABCB5Q2M3G0 1257 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 PATL1Q86TB9 770 aaKnown RBP12.47□□□□□ -0.41
LIMK2-202ENST00000333611 SLC13A5Q86YT5 568 aaPredicted RBP12.47□□□□□ -0.41
LIMK2-202ENST00000333611 PASD1Q8IV76 773 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 GALNT4Q8N4A0 578 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 PI4K2AQ9BTU6 479 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 GPRC5CQ9NQ84 441 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 CHST7Q9NS84 486 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 PPARGC1AQ9UBK2 798 aaKnown RBP12.47□□□□□ -0.41
LIMK2-202ENST00000333611 PARP2Q9UGN5 583 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 PODXLO00592 558 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 SLITRK3O94933 977 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 VAMP7P51809 220 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 PARP6Q2NL67 630 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 PAOXQ6QHF9 649 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 MIER3Q7Z3K6 550 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 SESTD1Q86VW0 696 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 PCDHB18PQ96TA0 734 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 ECSITQ9BQ95 431 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 LXNQ9BS40 222 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 EURLQ9NYK6 297 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 KIAA1551Q9HCM1 1747 aa12.47□□□□□ -0.41
LIMK2-202ENST00000333611 ATF2P15336 505 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 HOXD11P31277 338 aaPredicted RBP12.46□□□□□ -0.41
LIMK2-202ENST00000333611 CCNG1P51959 295 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 MRPS9P82933 396 aaKnown RBP12.46□□□□□ -0.41
LIMK2-202ENST00000333611 AP1B1Q10567 949 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 AP3B2Q13367 1082 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 PPP2R5EQ16537 467 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 VSTM1Q6UX27 236 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 B3GNT6Q6ZMB0 384 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 PPP1R21Q6ZMI0 780 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 CPXCR1Q8N123 301 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 ARHGAP24Q8N264 748 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 EIF1ADQ8N9N8 165 aaKnown RBP12.46□□□□□ -0.41
LIMK2-202ENST00000333611 USP6NLQ92738 828 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 DHRS1Q96LJ7 313 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms