RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 TMEM63BQ5T3F8 832 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 EEF1DP3Q658K8 133 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 GPAT2Q6NUI2 795 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 DNAJC24Q6P3W2 148 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 MOB2Q70IA6 237 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 WDTC1Q8N5D0 677 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 CEP120Q8N960 986 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 TFAP2BQ92481 460 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 RBM41Q96IZ5 413 aaKnown RBP15.43■□□□□ 0.06
TPM3-206ENST00000330188 NLRP4Q96MN2 994 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 SLITRK1Q96PX8 696 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 JPH2Q9BR39 696 aaPredicted RBP15.43■□□□□ 0.06
TPM3-206ENST00000330188 ZNF518BQ9C0D4 1074 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 STMN4Q9H169 189 aaPredicted RBP15.43■□□□□ 0.06
TPM3-206ENST00000330188 KCNH4Q9UQ05 1017 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 EVPLQ92817 2033 aa15.42■□□□□ 0.06
TPM3-206ENST00000330188 PI4K2BG5E9Z4 385 aa15.42■□□□□ 0.06
TPM3-206ENST00000330188 MOGSQ13724 837 aa15.42■□□□□ 0.06
TPM3-206ENST00000330188 ZNF365Q70YC5 407 aa15.42■□□□□ 0.06
TPM3-206ENST00000330188 CDR2LQ86X02 465 aaPredicted RBP15.42■□□□□ 0.06
TPM3-206ENST00000330188 ANKRD13AQ8IZ07 590 aa15.42■□□□□ 0.06
TPM3-206ENST00000330188 RCOR2Q8IZ40 523 aa15.42■□□□□ 0.06
TPM3-206ENST00000330188 ZBTB10Q96DT7 871 aa15.42■□□□□ 0.06
TPM3-206ENST00000330188 ANKRD36BP1Q96IX9 119 aa15.42■□□□□ 0.06
TPM3-206ENST00000330188 DNAJC17Q9NVM6 304 aaKnown RBP15.42■□□□□ 0.06
TPM3-206ENST00000330188 ZSWIM8A7E2V4 1837 aa15.42■□□□□ 0.06
TPM3-206ENST00000330188 F8VP50 259 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 INO80B-WBP1J3KQ70 363 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 TTC4O95801 387 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 TNNC2P02585 160 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 KRT1P04264 644 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 DRD4P21917 467 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 KLRC2P26717 231 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 CETN2P41208 172 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 CLCN3P51790 818 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 OSTNP61366 133 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 MBTD1Q05BQ5 628 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 SLC20A2Q08357 652 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 TFDP1Q14186 410 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 KCTD2Q14681 263 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 LONRF1Q17RB8 773 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 LRRC38Q5VT99 294 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 MFSD7Q6UXD7 560 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 MICALL1Q8N3F8 863 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 OTUD6BQ8N6M0 293 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 CCDC89Q8N998 374 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 PWWP2AQ96N64 755 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 INO80BQ9C086 356 aaPredicted RBP15.41■□□□□ 0.06
TPM3-206ENST00000330188 CDT1Q9H211 546 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 SMARCAD1Q9H4L7 1026 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 MINDY3Q9H8M7 445 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 IVNS1ABPQ9Y6Y0 642 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 LIASO43766 372 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 HBP1O60381 514 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 KRT10P13645 584 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 EIF4BP23588 611 aaKnown RBP15.41■□□□□ 0.06
TPM3-206ENST00000330188 SLC26A2P50443 739 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 IZUMO3Q5VZ72 239 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 EFCAB12Q6NXP0 572 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 DCUN1D2Q6PH85 259 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 ARMC9Q7Z3E5 817 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 TMEM192Q8IY95 271 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 CHMP6Q96FZ7 201 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 POLIQ9UNA4 740 aa15.41■□□□□ 0.06
TPM3-206ENST00000330188 CXCL8P10145 99 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 TXNP10599 105 aaKnown RBP15.4■□□□□ 0.06
TPM3-206ENST00000330188 TAP1Q03518 808 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 IFT88Q13099 833 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 PPIL2Q13356 520 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 KYNUQ16719 465 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 CYP4A22Q5TCH4 519 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 KAZNQ674X7 775 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 TXNRD3NBQ6F5E7 133 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 SMYD5Q6GMV2 418 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 PRUNE1Q86TP1 453 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 EXOC3L1Q86VI1 746 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 ERICH1Q86X53 443 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 BBOF1Q8ND07 529 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 SEC16BQ96JE7 1060 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 SERPINB12Q96P63 405 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 ZNF317Q96PQ6 595 aaPredicted RBP15.4■□□□□ 0.06
TPM3-206ENST00000330188 PDGFCQ9NRA1 345 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 NINJ2Q9NZG7 142 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 TNFSF13BQ9Y275 285 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 CEP83Q9Y592 693 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 YWHAEP62258 255 aaKnown RBP15.4■□□□□ 0.06
TPM3-206ENST00000330188 PIGHQ14442 188 aaPredicted RBP15.4■□□□□ 0.06
TPM3-206ENST00000330188 TMEM132AQ24JP5 1023 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 CCDC38Q502W7 563 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 ZFYVE27Q5T4F4 411 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 CHADLQ6NUI6 762 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 HIBCHQ6NVY1 386 aaPredicted RBP15.4■□□□□ 0.06
TPM3-206ENST00000330188 DENND1BQ6P3S1 775 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 DRICH1Q6PGQ1 229 aaPredicted RBP15.4■□□□□ 0.06
TPM3-206ENST00000330188 SPOCD1Q6ZMY3 1216 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 TAOK1Q7L7X3 1001 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 PACS2Q86VP3 889 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 NIPA2Q8N8Q9 360 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 IPO4Q8TEX9 1081 aaKnown RBP15.4■□□□□ 0.06
TPM3-206ENST00000330188 INTS9Q9NV88 658 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms