RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 PLEKHA4Q9H4M7 779 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 EPB41L5Q9HCM4 733 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 HMGXB4Q9UGU5 601 aa15.87■□□□□ 0.13
TPM3-205ENST00000328159 SCN1AP35498 2009 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 GOLGA6L10A0A0M3HER8 536 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 A0A0U1RQG5 324 aaPredicted RBP15.86■□□□□ 0.13
TPM3-205ENST00000328159 AOC2O75106 756 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 RECQL4O94761 1208 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 RARBP10826 455 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 PYGMP11217 842 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 HSPA6P17066 643 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 NKX3-2P78367 333 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 CACNB2Q08289 660 aaPredicted RBP15.86■□□□□ 0.13
TPM3-205ENST00000328159 MYO1EQ12965 1108 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 ORC1Q13415 861 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 UBXN11Q5T124 520 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 ALKAL1Q6UXT8 129 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 TTC39CQ8N584 583 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 BEST2Q8NFU1 509 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 FEZF2Q8TBJ5 459 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 TMEM176AQ96HP8 235 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 APOL6Q9BWW8 343 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 LHX5Q9H2C1 402 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 FAM124BQ9H5Z6 455 aaPredicted RBP15.86■□□□□ 0.13
TPM3-205ENST00000328159 CNTN3Q9P232 1028 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 GTF2IRD1Q9UHL9 959 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 NR2E1Q9Y466 385 aa15.86■□□□□ 0.13
TPM3-205ENST00000328159 ZSCAN5CA6NGD5 496 aaPredicted RBP15.85■□□□□ 0.13
TPM3-205ENST00000328159 MRPS6P82932 125 aaKnown RBP15.85■□□□□ 0.13
TPM3-205ENST00000328159 PTPN11Q06124 597 aaPredicted RBP15.85■□□□□ 0.13
TPM3-205ENST00000328159 INCA1Q0VD86 236 aa15.85■□□□□ 0.13
TPM3-205ENST00000328159 PPP2R5EQ16537 467 aa15.85■□□□□ 0.13
TPM3-205ENST00000328159 ERICH1Q86X53 443 aa15.85■□□□□ 0.13
TPM3-205ENST00000328159 TUBGCP4Q9UGJ1 667 aa15.85■□□□□ 0.13
TPM3-205ENST00000328159 BARX2Q9UMQ3 279 aaPredicted RBP15.85■□□□□ 0.13
TPM3-205ENST00000328159 TCRBV5S1A1TA0A578 114 aa15.85■□□□□ 0.13
TPM3-205ENST00000328159 TLR3O15455 904 aaKnown RBP15.85■□□□□ 0.13
TPM3-205ENST00000328159 GJB6O95452 261 aa15.85■□□□□ 0.13
TPM3-205ENST00000328159 AKAP5P24588 427 aa15.85■□□□□ 0.13
TPM3-205ENST00000328159 EPHB4P54760 987 aa15.85■□□□□ 0.13
TPM3-205ENST00000328159 CAP1Q01518 475 aa15.85■□□□□ 0.13
TPM3-205ENST00000328159 PAK2Q13177 524 aa15.85■□□□□ 0.13
TPM3-205ENST00000328159 GLRA4Q5JXX5 417 aa15.85■□□□□ 0.13
TPM3-205ENST00000328159 DNAJC24Q6P3W2 148 aa15.85■□□□□ 0.13
TPM3-205ENST00000328159 ADAT2Q7Z6V5 191 aaKnown RBP15.85■□□□□ 0.13
TPM3-205ENST00000328159 CCDC26Q8TAB7 109 aa15.85■□□□□ 0.13
TPM3-205ENST00000328159 CASKIN2Q8WXE0 1202 aa15.85■□□□□ 0.13
TPM3-205ENST00000328159 UBXN6Q9BZV1 441 aa15.85■□□□□ 0.13
TPM3-205ENST00000328159 ERVK-5Q9HDB9 667 aa15.85■□□□□ 0.13
TPM3-205ENST00000328159 UBQLN1Q9UMX0 589 aaKnown RBP15.85■□□□□ 0.13
TPM3-205ENST00000328159 ESYT3A0FGR9 886 aa15.84■□□□□ 0.13
TPM3-205ENST00000328159 BHMG1C9JSJ3 638 aaPredicted RBP15.84■□□□□ 0.13
TPM3-205ENST00000328159 PPEF2O14830 753 aa15.84■□□□□ 0.13
TPM3-205ENST00000328159 ADAMTS4O75173 837 aa15.84■□□□□ 0.13
TPM3-205ENST00000328159 VDRP11473 427 aa15.84■□□□□ 0.13
TPM3-205ENST00000328159 MAN1A1P33908 653 aa15.84■□□□□ 0.13
TPM3-205ENST00000328159 CARSP49589 748 aaKnown RBP15.84■□□□□ 0.13
TPM3-205ENST00000328159 NDST1P52848 882 aa15.84■□□□□ 0.13
TPM3-205ENST00000328159 SP3Q02447 781 aa15.84■□□□□ 0.13
TPM3-205ENST00000328159 SMC1AQ14683 1233 aaKnown RBP15.84■□□□□ 0.13
TPM3-205ENST00000328159 GDF6Q6KF10 455 aaPredicted RBP15.84■□□□□ 0.13
TPM3-205ENST00000328159 EMBQ6PCB8 327 aa15.84■□□□□ 0.13
TPM3-205ENST00000328159 MAATS1Q7Z4T9 603 aa15.84■□□□□ 0.13
TPM3-205ENST00000328159 FAM228AQ86W67 206 aa15.84■□□□□ 0.13
TPM3-205ENST00000328159 SLC13A5Q86YT5 568 aaPredicted RBP15.84■□□□□ 0.13
TPM3-205ENST00000328159 LRRC52Q8N7C0 313 aa15.84■□□□□ 0.13
TPM3-205ENST00000328159 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.84■□□□□ 0.13
TPM3-205ENST00000328159 C18orf25Q96B23 403 aaPredicted RBP15.84■□□□□ 0.13
TPM3-205ENST00000328159 GDAP1L1Q96MZ0 367 aa15.84■□□□□ 0.13
TPM3-205ENST00000328159 VIPAS39Q9H9C1 493 aa15.84■□□□□ 0.13
TPM3-205ENST00000328159 XPNPEP3Q9NQH7 507 aa15.84■□□□□ 0.13
TPM3-205ENST00000328159 IP6K2Q9UHH9 426 aa15.84■□□□□ 0.13
TPM3-205ENST00000328159 AMACRQ9UHK6 382 aa15.84■□□□□ 0.13
TPM3-205ENST00000328159 TRPV2Q9Y5S1 764 aa15.84■□□□□ 0.13
TPM3-205ENST00000328159 TMEM191CA6NGB0 347 aa15.83■□□□□ 0.12
TPM3-205ENST00000328159 M0QZ92 97 aa15.83■□□□□ 0.12
TPM3-205ENST00000328159 CCND3P30281 292 aaPredicted RBP15.83■□□□□ 0.12
TPM3-205ENST00000328159 C9orf57Q5W0N0 161 aa15.83■□□□□ 0.12
TPM3-205ENST00000328159 SND1Q7KZF4 910 aaKnown RBP eCLIP15.83■□□□□ 0.12
TPM3-205ENST00000328159 RSPH3Q86UC2 560 aa15.83■□□□□ 0.12
TPM3-205ENST00000328159 IFT81Q8WYA0 676 aa15.83■□□□□ 0.12
TPM3-205ENST00000328159 CAPNS2Q96L46 248 aa15.83■□□□□ 0.12
TPM3-205ENST00000328159 HEXIM2Q96MH2 286 aaKnown RBP15.83■□□□□ 0.12
TPM3-205ENST00000328159 TSPAN18Q96SJ8 248 aa15.83■□□□□ 0.12
TPM3-205ENST00000328159 PLVAPQ9BX97 442 aa15.83■□□□□ 0.12
TPM3-205ENST00000328159 RNF39Q9H2S5 420 aa15.83■□□□□ 0.12
TPM3-205ENST00000328159 PARP2Q9UGN5 583 aa15.83■□□□□ 0.12
TPM3-205ENST00000328159 LCMT1Q9UIC8 334 aa15.83■□□□□ 0.12
TPM3-205ENST00000328159 STRIP2Q9ULQ0 834 aa15.83■□□□□ 0.12
TPM3-205ENST00000328159 NFU1Q9UMS0 254 aa15.83■□□□□ 0.12
TPM3-205ENST00000328159 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.83■□□□□ 0.12
TPM3-205ENST00000328159 CDY2AQ9Y6F7 541 aa15.83■□□□□ 0.12
TPM3-205ENST00000328159 SMIM28A0A1B0GU29 152 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 MICAL2O94851 1124 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 RPL7AP62424 266 aaKnown RBP15.82■□□□□ 0.12
TPM3-205ENST00000328159 TAP1Q03518 808 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 CNGA2Q16280 664 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 PTPN20Q4JDL3 420 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 SGO2Q562F6 1265 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 XKR4Q5GH76 650 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms