RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 HCSTQ9UBK5 93 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 NXF1Q9UBU9 619 aaKnown RBP20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 JRKLQ9Y4A0 524 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 FNDC1Q4ZHG4 1894 aaPredicted RBP20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 DDX3XO00571 662 aaKnown RBP eCLIP20.04■□□□□ 0.83e-15■■□□□ 13.5
EXOSC3-201ENST00000327304 PODXLO00592 558 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 SPTLC1O15269 473 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 GCNT1Q02742 428 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 RNASELQ05823 741 aaKnown RBP20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 DSC1Q08554 894 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 CUL2Q13617 745 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 WHAMMP3Q1A5X7 153 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 WDR72Q3MJ13 1102 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 PAN2Q504Q3 1202 aaKnown RBP20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 ZNF667Q5HYK9 610 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 CEP112Q8N8E3 955 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 TSC1Q92574 1164 aa20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 CXXC1Q9P0U4 656 aaPredicted RBP20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.04■□□□□ 0.8
EXOSC3-201ENST00000327304 DGKIO75912 1065 aa20.03■□□□□ 0.8
EXOSC3-201ENST00000327304 ASPAP45381 313 aa20.03■□□□□ 0.8
EXOSC3-201ENST00000327304 MYO1EQ12965 1108 aa20.03■□□□□ 0.8
EXOSC3-201ENST00000327304 UPP1Q16831 310 aa20.03■□□□□ 0.8
EXOSC3-201ENST00000327304 FAM71AQ8IYT1 594 aa20.03■□□□□ 0.8
EXOSC3-201ENST00000327304 C3orf58Q8NDZ4 430 aa20.03■□□□□ 0.8
EXOSC3-201ENST00000327304 OLIG1Q8TAK6 271 aa20.03■□□□□ 0.8
EXOSC3-201ENST00000327304 SHC3Q92529 594 aa20.03■□□□□ 0.8
EXOSC3-201ENST00000327304 CAPN6Q9Y6Q1 641 aa20.03■□□□□ 0.8
EXOSC3-201ENST00000327304 TADA3O75528 432 aa20.02■□□□□ 0.8
EXOSC3-201ENST00000327304 MOCS3O95396 460 aa20.02■□□□□ 0.8
EXOSC3-201ENST00000327304 RPL9P32969 192 aaKnown RBP20.02■□□□□ 0.8
EXOSC3-201ENST00000327304 COLGALT2Q8IYK4 626 aa20.02■□□□□ 0.8
EXOSC3-201ENST00000327304 LNX1Q8TBB1 728 aaPredicted RBP20.02■□□□□ 0.8
EXOSC3-201ENST00000327304 ANKRD7Q92527 254 aa20.02■□□□□ 0.8
EXOSC3-201ENST00000327304 ZNF560Q96MR9 790 aa20.02■□□□□ 0.8
EXOSC3-201ENST00000327304 SMYD3Q9H7B4 428 aa20.02■□□□□ 0.8
EXOSC3-201ENST00000327304 DNAJB4Q9UDY4 337 aa20.02■□□□□ 0.8
EXOSC3-201ENST00000327304 SALL4Q9UJQ4 1053 aa20.02■□□□□ 0.8
EXOSC3-201ENST00000327304 CEP290O15078 2479 aa20.02■□□□□ 0.8
EXOSC3-201ENST00000327304 ATP1A1P05023 1023 aaKnown RBP20.02■□□□□ 0.79
EXOSC3-201ENST00000327304 TBXAS1P24557 533 aaPredicted RBP20.02■□□□□ 0.79
EXOSC3-201ENST00000327304 PNPLA4P41247 253 aa20.02■□□□□ 0.79
EXOSC3-201ENST00000327304 RAP1GAPP47736 663 aa20.02■□□□□ 0.79
EXOSC3-201ENST00000327304 TAF6P49848 677 aa20.02■□□□□ 0.79
EXOSC3-201ENST00000327304 UROC1Q96N76 676 aa20.02■□□□□ 0.79
EXOSC3-201ENST00000327304 NR2E3Q9Y5X4 410 aa20.02■□□□□ 0.79
EXOSC3-201ENST00000327304 SAR1BQ9Y6B6 198 aa20.02■□□□□ 0.79
EXOSC3-201ENST00000327304 F8W810 466 aa20.01■□□□□ 0.79
EXOSC3-201ENST00000327304 H2AFZP0C0S5 128 aa20.01■□□□□ 0.79
EXOSC3-201ENST00000327304 WEE2P0C1S8 567 aa20.01■□□□□ 0.79
EXOSC3-201ENST00000327304 PRLRP16471 622 aa20.01■□□□□ 0.79
EXOSC3-201ENST00000327304 TNFAIP3P21580 790 aa20.01■□□□□ 0.79
EXOSC3-201ENST00000327304 LILRA4P59901 499 aa20.01■□□□□ 0.79
EXOSC3-201ENST00000327304 TNNC1P63316 161 aa20.01■□□□□ 0.79
EXOSC3-201ENST00000327304 TUBB4BP68371 445 aa20.01■□□□□ 0.79
EXOSC3-201ENST00000327304 SV2CQ496J9 727 aa20.01■□□□□ 0.79
EXOSC3-201ENST00000327304 H2AFVQ71UI9 128 aa20.01■□□□□ 0.79
EXOSC3-201ENST00000327304 HERVK_113Q902F9 699 aa20.01■□□□□ 0.79
EXOSC3-201ENST00000327304 DDX27Q96GQ7 796 aaKnown RBP20.01■□□□□ 0.79
EXOSC3-201ENST00000327304 FAM193BQ96PV7 902 aaPredicted RBP20.01■□□□□ 0.79
EXOSC3-201ENST00000327304 AGPAT1Q99943 283 aa20.01■□□□□ 0.79
EXOSC3-201ENST00000327304 MRPL9Q9BYD2 267 aaKnown RBP20.01■□□□□ 0.79
EXOSC3-201ENST00000327304 BCO2Q9BYV7 579 aa20.01■□□□□ 0.79
EXOSC3-201ENST00000327304 SDCBP2Q9H190 292 aa20.01■□□□□ 0.79
EXOSC3-201ENST00000327304 NRDE2Q9H7Z3 1164 aa20.01■□□□□ 0.79
EXOSC3-201ENST00000327304 RC3H2Q9HBD1 1191 aaKnown RBP20.01■□□□□ 0.79
EXOSC3-201ENST00000327304 SNX9Q9Y5X1 595 aa20.01■□□□□ 0.79
EXOSC3-201ENST00000327304 A0A0A6YYK5 440 aaPredicted RBP20■□□□□ 0.79
EXOSC3-201ENST00000327304 ENC1O14682 589 aa20■□□□□ 0.79
EXOSC3-201ENST00000327304 ACO1P21399 889 aaKnown RBP20■□□□□ 0.79
EXOSC3-201ENST00000327304 IFI16Q16666 785 aaKnown RBP20■□□□□ 0.79
EXOSC3-201ENST00000327304 CD300LGQ6UXG3 332 aa20■□□□□ 0.79
EXOSC3-201ENST00000327304 GLYCTKQ8IVS8 523 aa20■□□□□ 0.79
EXOSC3-201ENST00000327304 LRRC43Q8N309 656 aa20■□□□□ 0.79
EXOSC3-201ENST00000327304 UBR7Q8N806 425 aa20■□□□□ 0.79
EXOSC3-201ENST00000327304 LRRN4CLQ8ND94 238 aa20■□□□□ 0.79
EXOSC3-201ENST00000327304 UBXN4Q92575 508 aa20■□□□□ 0.79
EXOSC3-201ENST00000327304 ZNF689Q96CS4 500 aaPredicted RBP20■□□□□ 0.79
EXOSC3-201ENST00000327304 PACSIN1Q9BY11 444 aa20■□□□□ 0.79
EXOSC3-201ENST00000327304 PCDHGC5Q9Y5F6 944 aa20■□□□□ 0.79
EXOSC3-201ENST00000327304 KPNA7A9QM74 516 aa19.99■□□□□ 0.79
EXOSC3-201ENST00000327304 CD58P19256 250 aa19.99■□□□□ 0.79
EXOSC3-201ENST00000327304 MAGEA10P43363 369 aaPredicted RBP19.99■□□□□ 0.79
EXOSC3-201ENST00000327304 CDH8P55286 799 aa19.99■□□□□ 0.79
EXOSC3-201ENST00000327304 HASPINQ8TF76 798 aa19.99■□□□□ 0.79
EXOSC3-201ENST00000327304 RSPH1Q8WYR4 309 aa19.99■□□□□ 0.79
EXOSC3-201ENST00000327304 MMS19Q96T76 1030 aa19.99■□□□□ 0.79
EXOSC3-201ENST00000327304 B3GAT3O94766 335 aa19.99■□□□□ 0.79
EXOSC3-201ENST00000327304 KIF4AO95239 1232 aa19.99■□□□□ 0.79
EXOSC3-201ENST00000327304 ITGB1P05556 798 aa19.99■□□□□ 0.79
EXOSC3-201ENST00000327304 P4HA1P13674 534 aa19.99■□□□□ 0.79
EXOSC3-201ENST00000327304 USP8P40818 1118 aa19.99■□□□□ 0.79
EXOSC3-201ENST00000327304 OR1G1P47890 313 aa19.99■□□□□ 0.79
EXOSC3-201ENST00000327304 NAA30Q147X3 362 aaPredicted RBP19.99■□□□□ 0.79
EXOSC3-201ENST00000327304 GDAP2Q9NXN4 497 aa19.99■□□□□ 0.79
EXOSC3-201ENST00000327304 PRG3Q9Y2Y8 225 aaPredicted RBP19.99■□□□□ 0.79
EXOSC3-201ENST00000327304 BUB1O43683 1085 aa19.98■□□□□ 0.79
EXOSC3-201ENST00000327304 NAP1L1P55209 391 aaKnown RBP19.98■□□□□ 0.79
EXOSC3-201ENST00000327304 SMYD5Q6GMV2 418 aa19.98■□□□□ 0.79
EXOSC3-201ENST00000327304 DCLRE1AQ6PJP8 1040 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms