RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 ULK4Q96C45 1275 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 JMJD4Q9H9V9 463 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 SCN8AQ9UQD0 1980 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 RAD51BO15315 384 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 H2AFYO75367 372 aaKnown RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 CLPTM1O96005 669 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 RPLP2P05387 115 aaKnown RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 EFHC2Q5JST6 749 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 NAA35Q5VZE5 725 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 IL17RAQ96F46 866 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 TBK1Q9UHD2 729 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 FAM98CQ17RN3 349 aaKnown RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 KNOP1Q1ED39 458 aaKnown RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 DDX17Q92841 729 aaKnown RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 LENG1Q96BZ8 264 aaPredicted RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 SGSM3Q96HU1 749 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 KCNK16Q96T55 309 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 NOVA2Q9UNW9 492 aaKnown RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 CDHR2Q9BYE9 1310 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 PLA2R1Q13018 1463 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 HSF2Q03933 536 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 SLC12A1Q13621 1099 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 PDIA5Q14554 519 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 TSHZ1Q6ZSZ6 1077 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 NOL6Q9H6R4 1146 aaKnown RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 SAYSD1Q9NPB0 183 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 OVOS2A0A0G2JMS6 1433 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 OVOS2A0A0J9YW53 1432 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 OVOS2Q6IE36 1432 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 SF3B1O75533 1304 aaKnown RBP eCLIP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 KDM6AO15550 1401 aaPredicted RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 RESTQ13127 1097 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 BYSLQ13895 437 aaKnown RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 STXBP2Q15833 593 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 PNPT1Q8TCS8 783 aaKnown RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 LRRIQ1Q96JM4 1722 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 MRPL4Q9BYD3 311 aaKnown RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 ITIH6Q6UXX5 1313 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 TRIM64CA6NLI5 447 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 ZNF197O14709 1029 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 MOCS3O95396 460 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 WARSP23381 471 aaKnown RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 MARK3P27448 753 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 LRIG3Q6UXM1 1119 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 APOBEC3FQ8IUX4 373 aaKnown RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 APBB2Q92870 758 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 FRMD8P1Q9BZ68 369 aaPredicted RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 HERC5Q9UII4 1024 aaKnown RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 TMCO1Q9UM00 188 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 PABPC1P11940 636 aaKnown RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 DCLK2Q8N568 766 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 PRMT3O60678 531 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 NOL4O94818 638 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 SERPINB9P50453 376 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 PMF1Q6P1K2 205 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 PCYOX1LQ8NBM8 494 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 PPHLN1Q8NEY8 458 aaKnown RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 TBRG1Q3YBR2 411 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 GLMNQ92990 594 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 TGS1Q96RS0 853 aaKnown RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 CUEDC1Q9NWM3 386 aaPredicted RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 ATP1A4Q13733 1029 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 TTLL4Q14679 1199 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 TSGA10IPQ3SY00 556 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 SELENONQ9NZV5 590 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 AP1S1P61966 158 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 C11orf57Q6ZUT1 292 aaPredicted RBP10.12□□□□□ -0.79
COL12A1-201ENST00000322507 PDCD6IPQ8WUM4 868 aaKnown RBP10.12□□□□□ -0.79
COL12A1-201ENST00000322507 GGA2Q9UJY4 613 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 UBXN6Q9BZV1 441 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 PALD1Q9ULE6 856 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 SFI1A8K8P3 1242 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 TTKP33981 857 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 CCT8P50990 548 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 ROR1Q01973 937 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 C10orf107Q8IVU9 208 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 SNIP1Q8TAD8 396 aaKnown RBP10.12□□□□□ -0.79
COL12A1-201ENST00000322507 CNOT8Q9UFF9 292 aaKnown RBP10.12□□□□□ -0.79
COL12A1-201ENST00000322507 CBY1Q9Y3M2 126 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 NCKAP5LQ9HCH0 1330 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 KLHL41O60662 606 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 PALMO75781 387 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 ANP32DO95626 131 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 APBA3O96018 575 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 AARS2Q5JTZ9 985 aaKnown RBP10.12□□□□□ -0.79
COL12A1-201ENST00000322507 ANKS6Q68DC2 871 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 FBXO38Q6PIJ6 1188 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 B3GNT6Q6ZMB0 384 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 ANKS3Q6ZW76 656 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 EGFL6Q8IUX8 553 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 SPOCK3Q9BQ16 436 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 NUP85Q9BW27 656 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 UTYO14607 1347 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 TRAPPC3O43617 180 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 ECE2O60344 883 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 CASP4P49662 377 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 CASP5P51878 434 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 GRAPQ13588 217 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 ZRANB3Q5FWF4 1079 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 GRAPLQ8TC17 118 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms