RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 MYH13Q9UKX3 1938 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 A8MUI8 341 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 ANKRD63C9JTQ0 380 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 RBP3P10745 1247 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 ECHS1P30084 290 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 TM4SF1P30408 202 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 CUL2Q13617 745 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 SLC27A3Q5K4L6 730 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 ARHGAP18Q8N392 663 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 ZCCHC9Q8N567 271 aaKnown RBP13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 MTBPQ96DY7 904 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 PAFAH2Q99487 392 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 SLC12A4Q9UP95 1085 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 EXTL3O43909 919 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 CREB1P16220 341 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 SKIV2L2P42285 1042 aaKnown RBP13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 ALDH18A1P54886 795 aaKnown RBP13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 CDH6P55285 790 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 DYNC1I2Q13409 638 aaKnown RBP13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 DNAL1Q4LDG9 190 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 PPP6R3Q5H9R7 873 aaPredicted RBP13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 SLC26A7Q8TE54 656 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 CCDC124Q96CT7 223 aaKnown RBP13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 TBC1D10AQ9BXI6 508 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 KIAA1683Q9H0B3 1180 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 SLCO1B3Q9NPD5 702 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 CYP39A1Q9NYL5 469 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 SEPT10Q9P0V9 454 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 SERPINB4P48594 390 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 NFIL3Q16649 462 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 FLAD1Q8NFF5 587 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 AS3MTQ9HBK9 375 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 E7ENQ6 273 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 GCNT1Q02742 428 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 MCL1Q07820 350 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 TFDP3Q5H9I0 405 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 RASSF3Q86WH2 238 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 APLFQ8IW19 511 aaPredicted RBP13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 FBXO36Q8NEA4 188 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 SPDYE1Q8NFV5 336 aaPredicted RBP13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 SNED1Q8TER0 1413 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 ZNF75CPQ92670 426 aaPredicted RBP13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 HEXIM2Q96MH2 286 aaKnown RBP13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 BCAS3Q9H6U6 928 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 CYP4F11Q9HBI6 524 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 RAB6BQ9NRW1 208 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 DNPEPQ9ULA0 475 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 SHOC2Q9UQ13 582 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 GINS2Q9Y248 185 aa13.39□□□□□ -0.27
DNMT3A-202ENST00000321117 FOXO6A8MYZ6 492 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 MYCNP04198 464 aaPredicted RBP13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 BCAR1P56945 870 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 HIC1Q14526 733 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 ARID3BQ8IVW6 561 aaPredicted RBP13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 NSUN6Q8TEA1 469 aaKnown RBP13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 KCNQ5Q9NR82 932 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 KIF13AQ9H1H9 1805 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 TMEM150BA6NC51 233 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 CALCAP01258 141 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 WEE2P0C1S8 567 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 UBTFL6P0CB48 400 aaPredicted RBP13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 GYS1P13807 737 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 ASPHQ12797 758 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 SNX30Q5VWJ9 437 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 C1orf228Q6PIY5 440 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 SPOCD1Q6ZMY3 1216 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 NME8Q8N427 588 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 TMEM143Q96AN5 459 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 RMDN2Q96LZ7 410 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 C17orf75Q9HAS0 396 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 AGAP1Q9UPQ3 857 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 SMAPO00193 183 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 ADRB2P07550 413 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 VIL1P09327 827 aaKnown RBP13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 GNAT1P11488 350 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 RPA3P35244 121 aaPredicted RBP13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 HADHBP55084 474 aaKnown RBP13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 COG7P83436 770 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 DUOXA2Q1HG44 320 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 SPOPLQ6IQ16 392 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 GPAT2Q6NUI2 795 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 CERS5Q8N5B7 392 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 SPATA18Q8TC71 538 aa13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 ZC3H7BQ9UGR2 993 aaKnown RBP13.38□□□□□ -0.27
DNMT3A-202ENST00000321117 ADRA1DP25100 572 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 VCPP55072 806 aaKnown RBP13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 FAM71DQ8N9W8 422 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 TCP10LQ8TDR4 215 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 PAPOLBQ9NRJ5 636 aaKnown RBP13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 G3BP2Q9UN86 482 aaKnown RBP13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 ZNF142P52746 1687 aaPredicted RBP13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 MYH3P11055 1940 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 TRIM49D1C9J1S8 452 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 SNRPAP09012 282 aaKnown RBP13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 ZSCAN5DPP0CG00 497 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 MYL2P10916 166 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 SAT1P21673 171 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 GARTP22102 1010 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 SSTR1P30872 391 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms