RNA–Protein interactions for RNA: ENST00000316738.11

EFCAB11-201, Transcript of EF-hand calcium binding domain 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EFCAB11, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-201ENST00000316738 DR1Q01658 176 aa11.68□□□□□ -0.54
EFCAB11-201ENST00000316738 WDR72Q3MJ13 1102 aa11.68□□□□□ -0.54
EFCAB11-201ENST00000316738 C1orf131Q8NDD1 294 aaKnown RBP11.68□□□□□ -0.54
EFCAB11-201ENST00000316738 LENG1Q96BZ8 264 aaPredicted RBP11.68□□□□□ -0.54
EFCAB11-201ENST00000316738 APBA2Q99767 749 aa11.68□□□□□ -0.54
EFCAB11-201ENST00000316738 ERP44Q9BS26 406 aa11.68□□□□□ -0.54
EFCAB11-201ENST00000316738 GCOM2Q9BZD3 368 aaPredicted RBP11.68□□□□□ -0.54
EFCAB11-201ENST00000316738 TRIP12Q14669 1992 aaPredicted RBP11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 GOLGA6BA6NDN3 693 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 POLR3GO15318 223 aaPredicted RBP11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 FGFR4P22455 802 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 PSEN2P49810 448 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 CPT1AP50416 773 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 KLF1Q13351 362 aaPredicted RBP11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 SLC27A1Q6PCB7 646 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 SCARA5Q6ZMJ2 495 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 DDX42Q86XP3 938 aaKnown RBP eCLIP11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 KATNAL2Q8IYT4 538 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 NIPA2Q8N8Q9 360 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 C18orf8Q96DM3 657 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 SNX27Q96L92 541 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 TWNKQ96RR1 684 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 ELOVL4Q9GZR5 314 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 CXCL16Q9H2A7 254 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 SMYD3Q9H7B4 428 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 FAM114A2Q9NRY5 505 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 ZDHHC18Q9NUE0 388 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 CYTH4Q9UIA0 394 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 DAPK3O43293 454 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 ABCB7O75027 752 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 CDH8P55286 799 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 TAS2R40P59535 323 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 NKX3-2P78367 333 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 ZNF394Q53GI3 561 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 DENND1BQ6P3S1 775 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 PHLDB2Q86SQ0 1253 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 ADPGKQ9BRR6 497 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 HERPUD2Q9BSE4 406 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 RAB17Q9H0T7 212 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 DPP3Q9NY33 737 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 PSD3Q9NYI0 1048 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 NXF1Q9UBU9 619 aaKnown RBP11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 IP6K2Q9UHH9 426 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 FAN1Q9Y2M0 1017 aa11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 UTP11Q9Y3A2 253 aaKnown RBP11.67□□□□□ -0.54
EFCAB11-201ENST00000316738 O00370 1275 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 TLR3O15455 904 aaKnown RBP11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 KRT19P08727 400 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 AXLP30530 894 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 POLR2BP30876 1174 aaKnown RBP11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 GABRB2P47870 512 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 TM4SF4P48230 202 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 FNTAP49354 379 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 RPL7AP62424 266 aaKnown RBP11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 TAP1Q03518 808 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 DMTNQ08495 405 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 XKR4Q5GH76 650 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 ADAT2Q7Z6V5 191 aaKnown RBP11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 JAMLQ86YT9 394 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 C3orf20Q8ND61 904 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 HPDLQ96IR7 371 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 ZMAT2Q96NC0 199 aaKnown RBP11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 RUNDC3BQ96NL0 473 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 HMGXB4Q9UGU5 601 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 ADAM21Q9UKJ8 722 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 TLL2Q9Y6L7 1015 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 MED7O43513 233 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 CYP2C9P11712 490 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 COILP38432 576 aaPredicted RBP11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 RBP5P82980 135 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 OGDHQ02218 1023 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 RHOT1Q8IXI2 618 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 TMEM40Q8WWA1 233 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 RIN2Q8WYP3 895 aaPredicted RBP11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 CCDC102AQ96A19 550 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 TMEM176AQ96HP8 235 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 TRIM51Q9BSJ1 452 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 EIF2AQ9BY44 585 aaKnown RBP11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 CNTN3Q9P232 1028 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 H0YGN5 161 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 RNF40O75150 1001 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 NPTXRO95502 500 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 PURAQ00577 322 aaKnown RBP11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 LRRC38Q5VT99 294 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 TRPV1Q8NER1 839 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 EXOC4Q96A65 974 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 ZIM3Q96PE6 472 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 PLVAPQ9BX97 442 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 ZFYVE28Q9HCC9 887 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 PRDM10Q9NQV6 1147 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 GRHL1Q9NZI5 618 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 AGAP1Q9UPQ3 857 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 NFS1Q9Y697 457 aa11.66□□□□□ -0.54
EFCAB11-201ENST00000316738 SCN10AQ9Y5Y9 1956 aa11.65□□□□□ -0.54
EFCAB11-201ENST00000316738 SCN1AP35498 2009 aa11.65□□□□□ -0.54
EFCAB11-201ENST00000316738 TREHO43280 583 aa11.65□□□□□ -0.54
EFCAB11-201ENST00000316738 GJB6O95452 261 aa11.65□□□□□ -0.54
EFCAB11-201ENST00000316738 CYP2B6P20813 491 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms