RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 ARRDC4Q8NCT1 418 aa13.46□□□□□ -0.25
SH3PXD2A-201ENST00000315994 SDCCAG3Q96C92 435 aa13.46□□□□□ -0.25
SH3PXD2A-201ENST00000315994 CYTH2Q99418 400 aa13.46□□□□□ -0.25
SH3PXD2A-201ENST00000315994 COLEC11Q9BWP8 271 aa13.46□□□□□ -0.25
SH3PXD2A-201ENST00000315994 CYP3A43Q9HB55 503 aa13.46□□□□□ -0.25
SH3PXD2A-201ENST00000315994 BTNL9Q6UXG8 535 aa13.46□□□□□ -0.26
SH3PXD2A-201ENST00000315994 C4orf22Q6V702 233 aa13.46□□□□□ -0.26
SH3PXD2A-201ENST00000315994 RBM15Q96T37 977 aaKnown RBP eCLIP13.46□□□□□ -0.263e-6■■■■□ 20.7
SH3PXD2A-201ENST00000315994 TRPC7Q9HCX4 862 aa13.46□□□□□ -0.26
SH3PXD2A-201ENST00000315994 MEIS2O14770 477 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 SOX10P56693 466 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 ACCSLQ4AC99 568 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 CASZ1Q86V15 1759 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 A0A0G2JND7 137 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 TFRCP02786 760 aaKnown RBP13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 SESN3P58005 492 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 CNTN2Q02246 1040 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 YWHAHQ04917 246 aaPredicted RBP13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 SLC12A1Q13621 1099 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 SPATA18Q8TC71 538 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 ASIC4Q96FT7 647 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 RAB6BQ9NRW1 208 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 XPO7Q9UIA9 1087 aaKnown RBP13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 NEU2Q9Y3R4 380 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 A0A0A6YYK5 440 aaPredicted RBP13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 ATP9BO43861 1147 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 CST8O60676 142 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 CASP2P42575 452 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 ART3Q13508 389 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 ANKMY2Q8IV38 441 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 PDCD7Q8N8D1 485 aaKnown RBP13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 ZNF512Q96ME7 567 aaPredicted RBP13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 PPCSQ9HAB8 311 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.45□□□□□ -0.262e-6■■□□□ 13.6
SH3PXD2A-201ENST00000315994 ZFATQ9P243 1243 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 TFR2Q9UP52 801 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 USH1CQ9Y6N9 552 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 GMNCA6NCL1 334 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 PRRG1O14668 218 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 MAP3K7O43318 606 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 LSM8O95777 96 aaKnown RBP13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 AGTP01019 485 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 NSUN2Q08J23 767 aaKnown RBP eCLIP13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 SV2AQ7L0J3 742 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 RMDN1Q96DB5 314 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 SMARCAL1Q9NZC9 954 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 ITGA11Q9UKX5 1188 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 FZD1Q9UP38 647 aa13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 ZC3H4Q9UPT8 1303 aaKnown RBP13.45□□□□□ -0.26
SH3PXD2A-201ENST00000315994 E5RI56 91 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 APRTP07741 180 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 NCAM1P13591 858 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 MDM2Q00987 491 aaPredicted RBP13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 BFSP2Q13515 415 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 OR6P1Q8NGX9 317 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 MTG1Q9BT17 334 aaPredicted RBP13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 FAM129AQ9BZQ8 928 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 SETD4Q9NVD3 440 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 APOBEC2Q9Y235 224 aaKnown RBP13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 ROBO3Q96MS0 1386 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 HOXA2O43364 376 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 PSMD10O75832 226 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 SATB1Q01826 763 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 SMTNL2Q2TAL5 461 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 ZPBP2Q6X784 338 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 FAM47EQ6ZV65 393 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 FGFR1OP2Q9NVK5 253 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 PLA2G6O60733 806 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 TYK2P29597 1187 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 SESN2P58004 480 aaPredicted RBP13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 BEND6Q5SZJ8 279 aaPredicted RBP13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 VSIG10LQ86VR7 867 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 SPDYE1Q8NFV5 336 aaPredicted RBP13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 SERPINI1Q99574 410 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 ERP44Q9BS26 406 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 FRMD8P1Q9BZ68 369 aaPredicted RBP13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 ISCUQ9H1K1 167 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 PRLRP16471 622 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 COILP38432 576 aaPredicted RBP13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 FNTAP49354 379 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 FSCBQ5H9T9 825 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 MTHFD1LQ6UB35 978 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 SLC13A5Q86YT5 568 aaPredicted RBP13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 ADGRF2Q8IZF7 708 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 TGS1Q96RS0 853 aaKnown RBP13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 DUSP9Q99956 384 aaKnown RBP13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 CYP39A1Q9NYL5 469 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 DSEQ9UL01 958 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 NEMP1O14524 444 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 AKR1A1P14550 325 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 HSPA9P38646 679 aaKnown RBP13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 MYL6P60660 151 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 ACAD11Q709F0 780 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 ANKRD7Q92527 254 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 GOLPH3Q9H4A6 298 aa13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 SPATS2LQ9NUQ6 558 aaKnown RBP13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 CHORDC1Q9UHD1 332 aaPredicted RBP13.44□□□□□ -0.26
SH3PXD2A-201ENST00000315994 MYPNQ86TC9 1320 aa13.43□□□□□ -0.26
SH3PXD2A-201ENST00000315994 H7C4K7 107 aa13.43□□□□□ -0.26
SH3PXD2A-201ENST00000315994 CYB561D2O14569 222 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms