RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CLTAP09496 248 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 HSPA9P38646 679 aaKnown RBP8.08□□□□□ -1.12
TRIM55-202ENST00000315962 IFI35P80217 286 aaPredicted RBP8.08□□□□□ -1.12
TRIM55-202ENST00000315962 HTRA3P83110 453 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 ITIH3Q06033 890 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 TFDP1Q14186 410 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 SLC10A6Q3KNW5 377 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 ACCSLQ4AC99 568 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 FAM47CQ5HY64 1035 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 CYB5D1Q6P9G0 228 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 CXCL17Q6UXB2 119 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 ZPBP2Q6X784 338 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 TSHZ1Q6ZSZ6 1077 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 RASAL3Q86YV0 1011 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 ZDHHC14Q8IZN3 488 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 C12orf29Q8N999 325 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 C1orf127Q8N9H9 656 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 C1orf131Q8NDD1 294 aaKnown RBP8.08□□□□□ -1.12
TRIM55-202ENST00000315962 GIMAP7Q8NHV1 300 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 C18orf8Q96DM3 657 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 TWNKQ96RR1 684 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 GOLGA2P5Q9HBQ8 144 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 KIAA1586Q9HCI6 787 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 PTPRHQ9HD43 1115 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 VTA1Q9NP79 307 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 SNTG2Q9NY99 539 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 SLC12A6Q9UHW9 1150 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 TPX2Q9ULW0 747 aaKnown RBP8.08□□□□□ -1.12
TRIM55-202ENST00000315962 PCDHB2Q9Y5E7 798 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 NFS1Q9Y697 457 aa8.08□□□□□ -1.12
TRIM55-202ENST00000315962 HMGB1P1B2RPK0 211 aaPredicted RBP8.07□□□□□ -1.12
TRIM55-202ENST00000315962 PI4K2BG5E9Z4 385 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 PGRMC1O00264 195 aaKnown RBP8.07□□□□□ -1.12
TRIM55-202ENST00000315962 MAPK13O15264 365 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 SMIM10L2AP0DMW4 78 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 SMIM10L2BP0DMW5 78 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 ZBTB48P10074 688 aaPredicted RBP8.07□□□□□ -1.12
TRIM55-202ENST00000315962 POLR2BP30876 1174 aaKnown RBP8.07□□□□□ -1.12
TRIM55-202ENST00000315962 MAPK4P31152 587 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 PHKA2P46019 1235 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 PPP2R2AP63151 447 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 GCNT1Q02742 428 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 MCL1Q07820 350 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 PPP1R7Q15435 360 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 TRIP13Q15645 432 aaPredicted RBP8.07□□□□□ -1.12
TRIM55-202ENST00000315962 CDCA2Q69YH5 1023 aaPredicted RBP8.07□□□□□ -1.12
TRIM55-202ENST00000315962 HIBCHQ6NVY1 386 aaPredicted RBP8.07□□□□□ -1.12
TRIM55-202ENST00000315962 MICALCLQ6ZW33 695 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 PRUNE1Q86TP1 453 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 BRSK2Q8IWQ3 736 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 WHAMMQ8TF30 809 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 ATG4AQ8WYN0 398 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 C18orf25Q96B23 403 aaPredicted RBP8.07□□□□□ -1.12
TRIM55-202ENST00000315962 HES6Q96HZ4 224 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 RNF39Q9H2S5 420 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 NXF3Q9H4D5 531 aaKnown RBP8.07□□□□□ -1.12
TRIM55-202ENST00000315962 PDZD7Q9H5P4 517 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 YY1AP1Q9H869 796 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 SLC24A3Q9HC58 644 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 ADAM22Q9P0K1 906 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 MORF4L1Q9UBU8 362 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 SIX4Q9UIU6 781 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 GABRQQ9UN88 632 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 AGAP1Q9UPQ3 857 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 L3MBTL1Q9Y468 752 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 DDX3YO15523 660 aaKnown RBP8.07□□□□□ -1.12
TRIM55-202ENST00000315962 NPTXRO95502 500 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 ELNP15502 786 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 VPS41P49754 854 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 CLDN10P78369 228 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 NFX1Q12986 1120 aaKnown RBP8.07□□□□□ -1.12
TRIM55-202ENST00000315962 IFI16Q16666 785 aaKnown RBP8.07□□□□□ -1.12
TRIM55-202ENST00000315962 ANKRD20A8PQ5CZ79 823 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 GNASQ5JWF2 1037 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 ACAD10Q6JQN1 1059 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 RGMBQ6NW40 437 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 CATSPER4Q7RTX7 472 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 TMC3Q7Z5M5 1100 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 TBC1D1Q86TI0 1168 aaPredicted RBP8.07□□□□□ -1.12
TRIM55-202ENST00000315962 IFNL1Q8IU54 200 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 CACNA2D3Q8IZS8 1091 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 UBA3Q8TBC4 463 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 EPS8L3Q8TE67 593 aaKnown RBP8.07□□□□□ -1.12
TRIM55-202ENST00000315962 MORC4Q8TE76 937 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 STXBP5LQ9Y2K9 1186 aa8.07□□□□□ -1.12
TRIM55-202ENST00000315962 MEIS3P2A8K0S8 358 aa8.06□□□□□ -1.12
TRIM55-202ENST00000315962 TRAPPC3O43617 180 aa8.06□□□□□ -1.12
TRIM55-202ENST00000315962 TSPAN1O60635 241 aa8.06□□□□□ -1.12
TRIM55-202ENST00000315962 AOC2O75106 756 aa8.06□□□□□ -1.12
TRIM55-202ENST00000315962 GRAP2O75791 330 aa8.06□□□□□ -1.12
TRIM55-202ENST00000315962 ASS1P00966 412 aaKnown RBP8.06□□□□□ -1.12
TRIM55-202ENST00000315962 CYP2C9P11712 490 aa8.06□□□□□ -1.12
TRIM55-202ENST00000315962 CHN1P15882 459 aa8.06□□□□□ -1.12
TRIM55-202ENST00000315962 CREB1P16220 341 aa8.06□□□□□ -1.12
TRIM55-202ENST00000315962 SCTRP47872 440 aa8.06□□□□□ -1.12
TRIM55-202ENST00000315962 AFF1P51825 1210 aaKnown RBP8.06□□□□□ -1.12
TRIM55-202ENST00000315962 MAP2K5Q13163 448 aa8.06□□□□□ -1.12
TRIM55-202ENST00000315962 ZKSCAN8Q15776 578 aaPredicted RBP8.06□□□□□ -1.12
TRIM55-202ENST00000315962 CCDC142Q17RM4 750 aa8.06□□□□□ -1.12
TRIM55-202ENST00000315962 CLEC16AQ2KHT3 1053 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms