RNA–Protein interactions for RNA: ENST00000311388.7

DEPDC7-202, Transcript of DEP domain containing 7, humanhuman

TSL 1 (best) BASIC

Gene DEPDC7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-202ENST00000311388 TUBGCP4Q9UGJ1 667 aa16.96■□□□□ 0.31
DEPDC7-202ENST00000311388 PIN4Q9Y237 131 aaKnown RBP16.96■□□□□ 0.31
DEPDC7-202ENST00000311388 RECQL4O94761 1208 aa16.96■□□□□ 0.3
DEPDC7-202ENST00000311388 PROSCO94903 275 aa16.96■□□□□ 0.3
DEPDC7-202ENST00000311388 ALDH1A1P00352 501 aa16.96■□□□□ 0.3
DEPDC7-202ENST00000311388 CD19P15391 556 aa16.96■□□□□ 0.3
DEPDC7-202ENST00000311388 AKAP5P24588 427 aa16.96■□□□□ 0.3
DEPDC7-202ENST00000311388 CACNB2Q08289 660 aaPredicted RBP16.96■□□□□ 0.3
DEPDC7-202ENST00000311388 NBPF20Q3BBV1 942 aa16.96■□□□□ 0.3
DEPDC7-202ENST00000311388 DAB2IPQ5VWQ8 1189 aa16.96■□□□□ 0.3
DEPDC7-202ENST00000311388 C18orf25Q96B23 403 aaPredicted RBP16.96■□□□□ 0.3
DEPDC7-202ENST00000311388 SLITRK6Q9H5Y7 841 aa16.96■□□□□ 0.3
DEPDC7-202ENST00000311388 MRPL47Q9HD33 250 aaKnown RBP16.96■□□□□ 0.3
DEPDC7-202ENST00000311388 CYTH4Q9UIA0 394 aa16.96■□□□□ 0.3
DEPDC7-202ENST00000311388 SCN1AP35498 2009 aa16.96■□□□□ 0.3
DEPDC7-202ENST00000311388 PDCD11Q14690 1871 aaKnown RBP16.95■□□□□ 0.3
DEPDC7-202ENST00000311388 NKX3-2P78367 333 aa16.95■□□□□ 0.3
DEPDC7-202ENST00000311388 PTPN11Q06124 597 aaPredicted RBP16.95■□□□□ 0.3
DEPDC7-202ENST00000311388 FEZF2Q8TBJ5 459 aa16.95■□□□□ 0.3
DEPDC7-202ENST00000311388 TMEM176AQ96HP8 235 aa16.95■□□□□ 0.3
DEPDC7-202ENST00000311388 NAP1L3Q99457 506 aaPredicted RBP16.95■□□□□ 0.3
DEPDC7-202ENST00000311388 LHX5Q9H2C1 402 aa16.95■□□□□ 0.3
DEPDC7-202ENST00000311388 RNF39Q9H2S5 420 aa16.95■□□□□ 0.3
DEPDC7-202ENST00000311388 PARVAQ9NVD7 372 aa16.95■□□□□ 0.3
DEPDC7-202ENST00000311388 CNTN3Q9P232 1028 aa16.95■□□□□ 0.3
DEPDC7-202ENST00000311388 AMACRQ9UHK6 382 aa16.95■□□□□ 0.3
DEPDC7-202ENST00000311388 GTF2IRD1Q9UHL9 959 aa16.95■□□□□ 0.3
DEPDC7-202ENST00000311388 SCINQ9Y6U3 715 aa16.95■□□□□ 0.3
DEPDC7-202ENST00000311388 TCRBV7S2A1N4TA0A589 114 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 SEPT4O43236 478 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 CALB1P05937 261 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 P4HA1P13674 534 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 SLC1A1P43005 524 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 TNNT3P45378 269 aaPredicted RBP16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 YARSP54577 528 aaKnown RBP16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 RWDD2BP57060 319 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 RPL7AP62424 266 aaKnown RBP16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 INCA1Q0VD86 236 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 GLRA4Q5JXX5 417 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 GDF6Q6KF10 455 aaPredicted RBP16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 WNT8BQ93098 351 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 ZBTB9Q96C00 473 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 APOL6Q9BWW8 343 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 CELF4Q9BZC1 486 aaKnown RBP16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 TRIM6Q9C030 488 aaPredicted RBP16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 TMEM191CA6NGB0 347 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 O00370 1275 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 TLR3O15455 904 aaKnown RBP16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 ADAMTS4O75173 837 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 SMC1AQ14683 1233 aaKnown RBP16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 CLUL1Q15846 466 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 PPP1R15BQ5SWA1 713 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 SEL1L2Q5TEA6 688 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 ERICH1Q86X53 443 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 PRELID2Q8N945 189 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 TJP2Q9UDY2 1190 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 NFU1Q9UMS0 254 aa16.94■□□□□ 0.3
DEPDC7-202ENST00000311388 TTI1O43156 1089 aa16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 MED7O43513 233 aa16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 CCND3P30281 292 aaPredicted RBP16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 NDST1P52848 882 aa16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 EPHB4P54760 987 aa16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 TAS2R40P59535 323 aa16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 ZNF252P-AS1Q0IIN9 211 aa16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 NOGQ13253 232 aa16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 PTPN20Q4JDL3 420 aa16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 CYP4A22Q5TCH4 519 aa16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 TAF2Q6P1X5 1199 aa16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 SND1Q7KZF4 910 aaKnown RBP eCLIP16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 FAM228AQ86W67 206 aa16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 SLC13A5Q86YT5 568 aaPredicted RBP16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 IFT81Q8WYA0 676 aa16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 DDX27Q96GQ7 796 aaKnown RBP16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 RNF186Q9NXI6 227 aa16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 KLK14Q9P0G3 267 aa16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 HPCAL4Q9UM19 191 aa16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 BARX2Q9UMQ3 279 aaPredicted RBP16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 CASP8AP2Q9UKL3 1982 aa16.93■□□□□ 0.3
DEPDC7-202ENST00000311388 H3BQF6 201 aa16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 FAM153BP0C7A2 387 aa16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 RARBP10826 455 aa16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 MRPS6P82932 125 aaKnown RBP16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 SIX1Q15475 284 aaPredicted RBP16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 FAM153CQ494X1 144 aa16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 XKR4Q5GH76 650 aa16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 SMG8Q8ND04 991 aaKnown RBP16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 BEST2Q8NFU1 509 aa16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 FAM153AQ9UHL3 310 aa16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 SMIM28A0A1B0GU29 152 aa16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 MICAL2O94851 1124 aa16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 ELNP15502 786 aa16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 CYP3A5P20815 502 aa16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 OGDHQ02218 1023 aa16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 MYO1EQ12965 1108 aa16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 ARRDC4Q8NCT1 418 aa16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 CAVIN3Q969G5 261 aa16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 HEXIM2Q96MH2 286 aaKnown RBP16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 VIPAS39Q9H9C1 493 aa16.92■□□□□ 0.3
DEPDC7-202ENST00000311388 IPPQ9Y573 584 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms