RNA–Protein interactions for RNA: ENST00000309083.6

PTMS-201, Transcript of parathymosin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTMS, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-201ENST00000309083 ELAVL2Q12926 359 aaKnown RBP20.42■□□□□ 0.86
PTMS-201ENST00000309083 SCARA3Q6AZY7 606 aa20.42■□□□□ 0.86
PTMS-201ENST00000309083 IQCEQ6IPM2 695 aa20.42■□□□□ 0.86
PTMS-201ENST00000309083 CACNA2D4Q7Z3S7 1137 aa20.42■□□□□ 0.86
PTMS-201ENST00000309083 LIMS2Q7Z4I7 341 aa20.42■□□□□ 0.86
PTMS-201ENST00000309083 TMCO2Q7Z6W1 182 aaPredicted RBP20.42■□□□□ 0.86
PTMS-201ENST00000309083 TOP6BLQ8N6T0 577 aa20.42■□□□□ 0.86
PTMS-201ENST00000309083 PDLIM2Q96JY6 352 aa20.42■□□□□ 0.86
PTMS-201ENST00000309083 ZNF558Q96NG5 402 aa20.42■□□□□ 0.86
PTMS-201ENST00000309083 DNAJB4Q9UDY4 337 aa20.42■□□□□ 0.86
PTMS-201ENST00000309083 STK39Q9UEW8 545 aa20.42■□□□□ 0.86
PTMS-201ENST00000309083 LUC7L2Q9Y383 392 aaKnown RBP20.42■□□□□ 0.86
PTMS-201ENST00000309083 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.41■□□□□ 0.86
PTMS-201ENST00000309083 NRP1O14786 923 aa20.41■□□□□ 0.86
PTMS-201ENST00000309083 GYPCP04921 128 aa20.41■□□□□ 0.86
PTMS-201ENST00000309083 PPM1AP35813 382 aa20.41■□□□□ 0.86
PTMS-201ENST00000309083 ASPAP45381 313 aa20.41■□□□□ 0.86
PTMS-201ENST00000309083 SLC11A1P49279 550 aa20.41■□□□□ 0.86
PTMS-201ENST00000309083 BCAR1P56945 870 aa20.41■□□□□ 0.86
PTMS-201ENST00000309083 ZBED6P86452 979 aa20.41■□□□□ 0.86
PTMS-201ENST00000309083 PTPN21Q16825 1174 aa20.41■□□□□ 0.86
PTMS-201ENST00000309083 IER5LQ5T953 404 aa20.41■□□□□ 0.86
PTMS-201ENST00000309083 SPOPLQ6IQ16 392 aa20.41■□□□□ 0.86
PTMS-201ENST00000309083 CD300LGQ6UXG3 332 aa20.41■□□□□ 0.86
PTMS-201ENST00000309083 CNGA4Q8IV77 575 aa20.41■□□□□ 0.86
PTMS-201ENST00000309083 ARHGEF19Q8IW93 802 aa20.41■□□□□ 0.86
PTMS-201ENST00000309083 C3orf58Q8NDZ4 430 aa20.41■□□□□ 0.86
PTMS-201ENST00000309083 CLP1Q92989 425 aaKnown RBP20.41■□□□□ 0.86
PTMS-201ENST00000309083 SUSD3Q96L08 255 aa20.41■□□□□ 0.86
PTMS-201ENST00000309083 PAAF1Q9BRP4 392 aa20.41■□□□□ 0.86
PTMS-201ENST00000309083 UBE2ZQ9H832 354 aaPredicted RBP20.41■□□□□ 0.86
PTMS-201ENST00000309083 NXF1Q9UBU9 619 aaKnown RBP20.41■□□□□ 0.86
PTMS-201ENST00000309083 DSEQ9UL01 958 aa20.41■□□□□ 0.86
PTMS-201ENST00000309083 RWDD3Q9Y3V2 267 aa20.41■□□□□ 0.86
PTMS-201ENST00000309083 SNX9Q9Y5X1 595 aa20.41■□□□□ 0.86
PTMS-201ENST00000309083 FHOD1Q9Y613 1164 aa20.41■□□□□ 0.86
PTMS-201ENST00000309083 MRPL42Q9Y6G3 142 aaKnown RBP20.41■□□□□ 0.86
PTMS-201ENST00000309083 PTPRZ1P23471 2315 aaPredicted RBP20.41■□□□□ 0.86
PTMS-201ENST00000309083 M0QZQ0 153 aa20.4■□□□□ 0.86
PTMS-201ENST00000309083 EPHB6O15197 1021 aa20.4■□□□□ 0.86
PTMS-201ENST00000309083 SPTLC1O15269 473 aa20.4■□□□□ 0.86
PTMS-201ENST00000309083 HUS1O60921 280 aa20.4■□□□□ 0.86
PTMS-201ENST00000309083 TACC1O75410 805 aa20.4■□□□□ 0.86
PTMS-201ENST00000309083 TADA2AO75478 443 aa20.4■□□□□ 0.86
PTMS-201ENST00000309083 KIF4AO95239 1232 aa20.4■□□□□ 0.86
PTMS-201ENST00000309083 GSDMDP57764 484 aa20.4■□□□□ 0.86
PTMS-201ENST00000309083 CCDC173Q0VFZ6 552 aa20.4■□□□□ 0.86
PTMS-201ENST00000309083 SPOUT1Q5T280 376 aaKnown RBP20.4■□□□□ 0.86
PTMS-201ENST00000309083 KCNT2Q6UVM3 1135 aa20.4■□□□□ 0.86
PTMS-201ENST00000309083 RRAGAQ7L523 313 aa20.4■□□□□ 0.86
PTMS-201ENST00000309083 TMEM86AQ8N2M4 240 aa20.4■□□□□ 0.86
PTMS-201ENST00000309083 TMEM130Q8N3G9 435 aa20.4■□□□□ 0.86
PTMS-201ENST00000309083 SHC3Q92529 594 aa20.4■□□□□ 0.86
PTMS-201ENST00000309083 SYN2Q92777 582 aaPredicted RBP20.4■□□□□ 0.86
PTMS-201ENST00000309083 KREMEN1Q96MU8 473 aa20.4■□□□□ 0.86
PTMS-201ENST00000309083 SPAG5Q96R06 1193 aa20.4■□□□□ 0.86
PTMS-201ENST00000309083 DNAI2Q9GZS0 605 aa20.4■□□□□ 0.86
PTMS-201ENST00000309083 ADAM28Q9UKQ2 775 aa20.4■□□□□ 0.86
PTMS-201ENST00000309083 PRG3Q9Y2Y8 225 aaPredicted RBP20.4■□□□□ 0.86
PTMS-201ENST00000309083 CYB561D2O14569 222 aa20.39■□□□□ 0.85
PTMS-201ENST00000309083 ODC1P11926 461 aa20.39■□□□□ 0.85
PTMS-201ENST00000309083 TYMPP19971 482 aa20.39■□□□□ 0.85
PTMS-201ENST00000309083 JAM2P57087 298 aa20.39■□□□□ 0.85
PTMS-201ENST00000309083 APBA1Q02410 837 aa20.39■□□□□ 0.85
PTMS-201ENST00000309083 ARID5BQ14865 1188 aa20.39■□□□□ 0.85
PTMS-201ENST00000309083 LEXMQ3ZCV2 418 aa20.39■□□□□ 0.85
PTMS-201ENST00000309083 TIGD5Q53EQ6 642 aa20.39■□□□□ 0.85
PTMS-201ENST00000309083 DSTYKQ6XUX3 929 aa20.39■□□□□ 0.85
PTMS-201ENST00000309083 APPL2Q8NEU8 664 aa20.39■□□□□ 0.85
PTMS-201ENST00000309083 BAP1Q92560 729 aa20.39■□□□□ 0.85
PTMS-201ENST00000309083 SENP8Q96LD8 212 aa20.39■□□□□ 0.85
PTMS-201ENST00000309083 MARCH5Q9NX47 278 aa20.39■□□□□ 0.85
PTMS-201ENST00000309083 CACNG4Q9UBN1 327 aa20.39■□□□□ 0.85
PTMS-201ENST00000309083 CNTN6Q9UQ52 1028 aa20.39■□□□□ 0.85
PTMS-201ENST00000309083 PCDHB12Q9Y5F1 795 aa20.39■□□□□ 0.85
PTMS-201ENST00000309083 PLXNA3P51805 1871 aa20.39■□□□□ 0.85
PTMS-201ENST00000309083 SF3B1O75533 1304 aaKnown RBP eCLIP20.38■□□□□ 0.853e-6■■■■■ 44.6
PTMS-201ENST00000309083 AKR1B15C9JRZ8 316 aaPredicted RBP20.38■□□□□ 0.85
PTMS-201ENST00000309083 SYN3O14994 580 aa20.38■□□□□ 0.85
PTMS-201ENST00000309083 CYP11A1P05108 521 aa20.38■□□□□ 0.85
PTMS-201ENST00000309083 CCDC172P0C7W6 258 aa20.38■□□□□ 0.85
PTMS-201ENST00000309083 CASP14P31944 242 aa20.38■□□□□ 0.85
PTMS-201ENST00000309083 STAT1P42224 750 aa20.38■□□□□ 0.85
PTMS-201ENST00000309083 INCA1Q0VD86 236 aa20.38■□□□□ 0.85
PTMS-201ENST00000309083 TCF15Q12870 199 aa20.38■□□□□ 0.85
PTMS-201ENST00000309083 RAPGEF1Q13905 1077 aa20.38■□□□□ 0.85
PTMS-201ENST00000309083 DRAP1Q14919 205 aaPredicted RBP20.38■□□□□ 0.85
PTMS-201ENST00000309083 GJB7Q6PEY0 223 aa20.38■□□□□ 0.85
PTMS-201ENST00000309083 SLC39A11Q8N1S5 342 aa20.38■□□□□ 0.85
PTMS-201ENST00000309083 UBR7Q8N806 425 aa20.38■□□□□ 0.85
PTMS-201ENST00000309083 COLGALT1Q8NBJ5 622 aa20.38■□□□□ 0.85
PTMS-201ENST00000309083 IGSF21Q96ID5 467 aa20.38■□□□□ 0.85
PTMS-201ENST00000309083 MMS19Q96T76 1030 aa20.38■□□□□ 0.85
PTMS-201ENST00000309083 NLRC4Q9NPP4 1024 aa20.38■□□□□ 0.85
PTMS-201ENST00000309083 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.38■□□□□ 0.856e-8■■■■■ 57.6
PTMS-201ENST00000309083 SPG21Q9NZD8 308 aa20.38■□□□□ 0.85
PTMS-201ENST00000309083 PCDHB8Q9UN66 801 aa20.38■□□□□ 0.85
PTMS-201ENST00000309083 POLIQ9UNA4 740 aa20.38■□□□□ 0.85
PTMS-201ENST00000309083 KMT2EQ8IZD2 1858 aa20.37■□□□□ 0.85
PTMS-201ENST00000309083 EPG5Q9HCE0 2579 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms