RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 Q3C1V9 767 aa11.29□□□□□ -0.6
MUC4-201ENST00000308466 CD302Q8IX05 232 aa11.29□□□□□ -0.6
MUC4-201ENST00000308466 ZC3H3Q8IXZ2 948 aaKnown RBP11.29□□□□□ -0.6
MUC4-201ENST00000308466 OR5B17Q8NGF7 314 aa11.29□□□□□ -0.6
MUC4-201ENST00000308466 BORCS6Q96GS4 357 aa11.29□□□□□ -0.6
MUC4-201ENST00000308466 FERMT1Q9BQL6 677 aa11.29□□□□□ -0.6
MUC4-201ENST00000308466 TXNDC16Q9P2K2 825 aa11.29□□□□□ -0.6
MUC4-201ENST00000308466 RIPK2O43353 540 aa11.29□□□□□ -0.6
MUC4-201ENST00000308466 PRPSAP2O60256 369 aa11.29□□□□□ -0.6
MUC4-201ENST00000308466 GNAT1P11488 350 aa11.29□□□□□ -0.6
MUC4-201ENST00000308466 MAGEA4P43358 317 aa11.29□□□□□ -0.6
MUC4-201ENST00000308466 NFIL3Q16649 462 aa11.29□□□□□ -0.6
MUC4-201ENST00000308466 PPP1R2P3Q6NXS1 205 aa11.29□□□□□ -0.6
MUC4-201ENST00000308466 ZNF677Q86XU0 584 aa11.29□□□□□ -0.6
MUC4-201ENST00000308466 ABRAQ8N0Z2 381 aa11.29□□□□□ -0.6
MUC4-201ENST00000308466 EMC1Q8N766 993 aa11.29□□□□□ -0.6
MUC4-201ENST00000308466 C7orf43Q8WVR3 580 aa11.29□□□□□ -0.6
MUC4-201ENST00000308466 ABTB1Q969K4 478 aaPredicted RBP11.29□□□□□ -0.6
MUC4-201ENST00000308466 DDX20Q9UHI6 824 aaKnown RBP11.29□□□□□ -0.6
MUC4-201ENST00000308466 ARAP2Q8WZ64 1704 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 CST8O60676 142 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 MAP3K6O95382 1288 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 INHBAP08476 426 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 CHRNB2P17787 502 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 RGS7P49802 495 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 EFCAB12Q6NXP0 572 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 CYB5D1Q6P9G0 228 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 MAP7D3Q8IWC1 876 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 RNF168Q8IYW5 571 aaPredicted RBP11.28□□□□□ -0.6
MUC4-201ENST00000308466 RCOR2Q8IZ40 523 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 KLHL23Q8NBE8 558 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 HELQQ8TDG4 1101 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 FAM210AQ96ND0 272 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 NIF3L1Q9GZT8 377 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 ALG13Q9NP73 1137 aaKnown RBP11.28□□□□□ -0.6
MUC4-201ENST00000308466 CISHQ9NSE2 258 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 AGAP1Q9UPQ3 857 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 F5H423 210 aaPredicted RBP11.28□□□□□ -0.6
MUC4-201ENST00000308466 CDH16O75309 829 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 LYPLA2O95372 231 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 GLRA2P23416 452 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 GRM1Q13255 1194 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 DCAF12L1Q5VU92 463 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 TDRD10Q5VZ19 366 aaKnown RBP11.28□□□□□ -0.6
MUC4-201ENST00000308466 TTC27Q6P3X3 843 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 ZNF449Q6P9G9 518 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 UBA3Q8TBC4 463 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 SLC16A10Q8TF71 515 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 FIZ1Q96SL8 496 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 MIS12Q9H081 205 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 STXBP5LQ9Y2K9 1186 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 RPS6KA3P51812 740 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 CDH6P55285 790 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 CDH8P55286 799 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 TAF11Q15544 211 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 ZBTB41Q5SVQ8 909 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 ATF7IP2Q5U623 682 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.28□□□□□ -0.6
MUC4-201ENST00000308466 EIF1ADQ8N9N8 165 aaKnown RBP11.28□□□□□ -0.6
MUC4-201ENST00000308466 CHST13Q8NET6 341 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 OR6B3Q8NGW1 331 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 CCHCR1Q8TD31 782 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 STAMBPL1Q96FJ0 436 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 KLF6Q99612 283 aaPredicted RBP11.28□□□□□ -0.6
MUC4-201ENST00000308466 CTNNAL1Q9UBT7 734 aa11.28□□□□□ -0.6
MUC4-201ENST00000308466 OGTO15294 1046 aa11.27□□□□□ -0.6
MUC4-201ENST00000308466 ZC3H11AO75152 810 aaKnown RBP eCLIP11.27□□□□□ -0.6
MUC4-201ENST00000308466 TOM1L1O75674 476 aa11.27□□□□□ -0.6
MUC4-201ENST00000308466 ZSCAN5DPP0CG00 497 aa11.27□□□□□ -0.6
MUC4-201ENST00000308466 OSBPP22059 807 aa11.27□□□□□ -0.6
MUC4-201ENST00000308466 RAP1GAPP47736 663 aa11.27□□□□□ -0.6
MUC4-201ENST00000308466 TMEM62Q0P6H9 643 aa11.27□□□□□ -0.6
MUC4-201ENST00000308466 MXD4Q14582 209 aaPredicted RBP11.27□□□□□ -0.6
MUC4-201ENST00000308466 PSMD6Q15008 389 aa11.27□□□□□ -0.6
MUC4-201ENST00000308466 SMAD1Q15797 465 aaKnown RBP11.27□□□□□ -0.6
MUC4-201ENST00000308466 ANKRD20A3Q5VUR7 823 aa11.27□□□□□ -0.6
MUC4-201ENST00000308466 C1orf228Q6PIY5 440 aa11.27□□□□□ -0.6
MUC4-201ENST00000308466 DLK2Q6UY11 383 aa11.27□□□□□ -0.6
MUC4-201ENST00000308466 GMLQ99445 158 aa11.27□□□□□ -0.6
MUC4-201ENST00000308466 MMP19Q99542 508 aa11.27□□□□□ -0.6
MUC4-201ENST00000308466 TMEM121Q9BTD3 319 aa11.27□□□□□ -0.6
MUC4-201ENST00000308466 C2orf40Q9H1Z8 148 aa11.27□□□□□ -0.6
MUC4-201ENST00000308466 C10orf88Q9H8K7 445 aa11.27□□□□□ -0.6
MUC4-201ENST00000308466 NUB1Q9Y5A7 615 aa11.27□□□□□ -0.6
MUC4-201ENST00000308466 CNTNAP1P78357 1384 aa11.27□□□□□ -0.6
MUC4-201ENST00000308466 PPFIA2O75334 1257 aa11.27□□□□□ -0.61
MUC4-201ENST00000308466 MT-ND3P03897 115 aa11.27□□□□□ -0.61
MUC4-201ENST00000308466 RFC5P40937 340 aa11.27□□□□□ -0.61
MUC4-201ENST00000308466 RPL7AP62424 266 aaKnown RBP11.27□□□□□ -0.61
MUC4-201ENST00000308466 IER5Q5VY09 327 aa11.27□□□□□ -0.61
MUC4-201ENST00000308466 DPY19L2Q6NUT2 758 aa11.27□□□□□ -0.61
MUC4-201ENST00000308466 C12orf56Q8IXR9 622 aa11.27□□□□□ -0.61
MUC4-201ENST00000308466 LMNTD2Q8IXW0 634 aa11.27□□□□□ -0.61
MUC4-201ENST00000308466 SAMD3Q8N6K7 520 aa11.27□□□□□ -0.61
MUC4-201ENST00000308466 CFAP36Q96G28 342 aa11.27□□□□□ -0.61
MUC4-201ENST00000308466 CGRRF1Q99675 332 aa11.27□□□□□ -0.61
MUC4-201ENST00000308466 RHBDL2Q9NX52 303 aa11.27□□□□□ -0.61
MUC4-201ENST00000308466 STRIP2Q9ULQ0 834 aa11.27□□□□□ -0.61
MUC4-201ENST00000308466 L3MBTL1Q9Y468 752 aa11.27□□□□□ -0.61
MUC4-201ENST00000308466 TNRC6CQ9HCJ0 1690 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms