RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 FRMD4AQ9P2Q2 1039 aaPredicted RBP11□□□□□ -0.65
MSRB3-201ENST00000308259 HBS1LQ9Y450 684 aaKnown RBP11□□□□□ -0.65
MSRB3-201ENST00000308259 TISP43B9A030 160 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 OR6B1O95007 311 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 CDK7P50613 346 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 RABGAP1LQ5R372 815 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 TMC3Q7Z5M5 1100 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 SLC7A5P1Q8MH63 180 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 EDEM3Q9BZQ6 932 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 FHDC1Q9C0D6 1143 aaPredicted RBP11□□□□□ -0.65
MSRB3-201ENST00000308259 CEP44Q9C0F1 390 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 NPHS2Q9NP85 383 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 TRNAU1APQ9NX07 287 aaKnown RBP11□□□□□ -0.65
MSRB3-201ENST00000308259 NDUFA13Q9P0J0 144 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 POC1B-GALNT4F8VUJ3 575 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 ADCY6O43306 1168 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 CCDC22O60826 627 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 EPHB1P54762 984 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 HDAC4P56524 1084 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 LSAMPQ13449 338 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 TRIP10Q15642 601 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 ZYXQ15942 572 aaKnown RBP11□□□□□ -0.65
MSRB3-201ENST00000308259 CCDC153Q494R4 210 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 TAF1BQ53T94 588 aaPredicted RBP11□□□□□ -0.65
MSRB3-201ENST00000308259 ZNF746Q6NUN9 644 aaPredicted RBP11□□□□□ -0.65
MSRB3-201ENST00000308259 NUDCD3Q8IVD9 361 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 SLC25A41Q8N5S1 370 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 LRRC57Q8N9N7 239 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 SYN2Q92777 582 aaPredicted RBP11□□□□□ -0.65
MSRB3-201ENST00000308259 DCUN1D5Q9BTE7 237 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 TRPC7Q9HCX4 862 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 PCNTO95613 3336 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 MYH7BA7E2Y1 1941 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 ASTN1O14525 1302 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 XPO1O14980 1071 aaKnown RBP11□□□□□ -0.65
MSRB3-201ENST00000308259 MSH4O15457 936 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 WFS1O76024 890 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 H2AFZP0C0S5 128 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 EPHA7Q15375 998 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 H2AFVQ71UI9 128 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 PIGWQ7Z7B1 504 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 LNX1Q8TBB1 728 aaPredicted RBP11□□□□□ -0.65
MSRB3-201ENST00000308259 SLC35C1Q96A29 364 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 RILPQ96NA2 401 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 ACP6Q9NPH0 428 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 RREB1Q92766 1687 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 hCG_1984214I3L0E3 225 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 EIF3FO00303 357 aaPredicted RBP10.99□□□□□ -0.65
MSRB3-201ENST00000308259 CFBP00751 764 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 CA4P22748 312 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 JAG1P78504 1218 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 SPIRE1Q08AE8 756 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 ORC2Q13416 577 aaPredicted RBP10.99□□□□□ -0.65
MSRB3-201ENST00000308259 GPATCH4Q5T3I0 446 aaKnown RBP10.99□□□□□ -0.65
MSRB3-201ENST00000308259 DPY19L2P1Q6NXN4 242 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 HHIPL2Q6UWX4 724 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 GALNT4Q8N4A0 578 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 TTC30BQ8N4P2 665 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 ICA1LQ8NDH6 482 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 ERMNQ8TAM6 284 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 ARHGEF26Q96DR7 871 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 PCIF1Q9H4Z3 704 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 SIX2Q9NPC8 291 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 GIMAP4Q9NUV9 329 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 AMFRQ9UKV5 643 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 CCDC188H7C350 402 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 PSMG1O95456 288 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 NEK3P51956 506 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 CYP4F22Q6NT55 531 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 APOBEC3HQ6NTF7 200 aaKnown RBP10.99□□□□□ -0.65
MSRB3-201ENST00000308259 GPC6Q9Y625 555 aaPredicted RBP10.99□□□□□ -0.65
MSRB3-201ENST00000308259 NOVP48745 357 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 ARFIP2P53365 341 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 ASPHQ12797 758 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 PRKG1Q13976 671 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 CBWD6Q4V339 395 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 CBWD3Q5JTY5 395 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 CBWD5Q5RIA9 395 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 MAP3K21Q5TCX8 1036 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 SLC2A7Q6PXP3 512 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 CPNE8Q86YQ8 564 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 SLC35G2Q8TBE7 412 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 ETNPPLQ8TBG4 499 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 PPP2R3CQ969Q6 453 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 FAM163AQ96GL9 167 aaPredicted RBP10.99□□□□□ -0.65
MSRB3-201ENST00000308259 EIF2AK1Q9BQI3 630 aaKnown RBP10.99□□□□□ -0.65
MSRB3-201ENST00000308259 ZNF341Q9BYN7 854 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 ERVK-5Q9HDB9 667 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 APPL1Q9UKG1 709 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 N6AMT1Q9Y5N5 214 aa10.99□□□□□ -0.65
MSRB3-201ENST00000308259 RASA4BC9J798 803 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 RASA4O43374 803 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 HSPA8P11142 646 aaKnown RBP10.98□□□□□ -0.65
MSRB3-201ENST00000308259 TNFRSF8P28908 595 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 KRT81Q14533 505 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 PDZD8Q8NEN9 1154 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 ATP8B4Q8TF62 1192 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 RUNDC3BQ96NL0 473 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 THTPAQ9BU02 230 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 CNOT7Q9UIV1 285 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms