RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 SCARA3Q6AZY7 606 aa18.36■□□□□ 0.53
HMGCLL1-202ENST00000308161 CENPPQ6IPU0 288 aa18.36■□□□□ 0.53
HMGCLL1-202ENST00000308161 ZNF507Q8TCN5 953 aa18.36■□□□□ 0.53
HMGCLL1-202ENST00000308161 FAM200AQ8TCP9 573 aa18.36■□□□□ 0.53
HMGCLL1-202ENST00000308161 SCFD1Q8WVM8 642 aa18.36■□□□□ 0.53
HMGCLL1-202ENST00000308161 ANKRD36BP1Q96IX9 119 aa18.36■□□□□ 0.53
HMGCLL1-202ENST00000308161 AVENQ9NQS1 362 aaPredicted RBP18.36■□□□□ 0.53
HMGCLL1-202ENST00000308161 ARHGEF3Q9NR81 526 aa18.36■□□□□ 0.53
HMGCLL1-202ENST00000308161 AGPAT3Q9NRZ7 376 aa18.36■□□□□ 0.53
HMGCLL1-202ENST00000308161 GDE1Q9NZC3 331 aa18.36■□□□□ 0.53
HMGCLL1-202ENST00000308161 UBE4BO95155 1302 aa18.35■□□□□ 0.53
HMGCLL1-202ENST00000308161 NRG2O14511 850 aaPredicted RBP18.35■□□□□ 0.53
HMGCLL1-202ENST00000308161 PI15O43692 258 aa18.35■□□□□ 0.53
HMGCLL1-202ENST00000308161 ACTN4O43707 911 aaKnown RBP18.35■□□□□ 0.53
HMGCLL1-202ENST00000308161 TNNC2P02585 160 aa18.35■□□□□ 0.53
HMGCLL1-202ENST00000308161 SLFN14P0C7P3 912 aa18.35■□□□□ 0.53
HMGCLL1-202ENST00000308161 CLCN5P51795 746 aa18.35■□□□□ 0.53
HMGCLL1-202ENST00000308161 MGAT5BQ3V5L5 792 aa18.35■□□□□ 0.53
HMGCLL1-202ENST00000308161 POTEHQ6S545 545 aa18.35■□□□□ 0.53
HMGCLL1-202ENST00000308161 HS2ST1Q7LGA3 356 aa18.35■□□□□ 0.53
HMGCLL1-202ENST00000308161 BORCS6Q96GS4 357 aa18.35■□□□□ 0.53
HMGCLL1-202ENST00000308161 RTP3Q9BQQ7 232 aa18.35■□□□□ 0.53
HMGCLL1-202ENST00000308161 ZCWPW1Q9H0M4 648 aa18.35■□□□□ 0.53
HMGCLL1-202ENST00000308161 SLITRK6Q9H5Y7 841 aa18.35■□□□□ 0.53
HMGCLL1-202ENST00000308161 TBC1D17Q9HA65 648 aa18.35■□□□□ 0.53
HMGCLL1-202ENST00000308161 FAM86C1Q9NVL1 165 aa18.35■□□□□ 0.53
HMGCLL1-202ENST00000308161 ITGA11Q9UKX5 1188 aa18.35■□□□□ 0.53
HMGCLL1-202ENST00000308161 PTPRJQ12913 1337 aa18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 PVALEFA0A1B0GWK0 134 aa18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 H0Y858 1186 aa18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 TGFB1I1O43294 461 aa18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 HUS1O60921 280 aa18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 DLATP10515 647 aaKnown RBP18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 AOC1P19801 751 aa18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 CMA1P23946 247 aa18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 RBP5P82980 135 aa18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 EHHADHQ08426 723 aa18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 TEAD2Q15562 447 aa18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 SNRNP35Q16560 246 aaKnown RBP18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 TANGO2Q6ICL3 276 aa18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 ALYREFQ86V81 257 aaKnown RBP18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 OR5B17Q8NGF7 314 aa18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 PAGE5Q96GU1 130 aa18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 DNAJC25Q9H1X3 360 aa18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 SLC2A4RGQ9NR83 387 aa18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 EXOC1Q9NV70 894 aa18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 INTS13Q9NVM9 706 aa18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 ABI2Q9NYB9 513 aaPredicted RBP18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 L1RE1Q9UN81 338 aa18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 ATP6V1DQ9Y5K8 247 aa18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 SNX9Q9Y5X1 595 aa18.34■□□□□ 0.53
HMGCLL1-202ENST00000308161 A0A1W2PRU2 124 aa18.33■□□□□ 0.53
HMGCLL1-202ENST00000308161 GALR2O43603 387 aaPredicted RBP18.33■□□□□ 0.53
HMGCLL1-202ENST00000308161 TSPY1Q01534 308 aa18.33■□□□□ 0.53
HMGCLL1-202ENST00000308161 SNW1Q13573 536 aaKnown RBP18.33■□□□□ 0.53
HMGCLL1-202ENST00000308161 BECN1Q14457 450 aa18.33■□□□□ 0.53
HMGCLL1-202ENST00000308161 SURF1Q15526 300 aa18.33■□□□□ 0.53
HMGCLL1-202ENST00000308161 FAM78AQ5JUQ0 283 aa18.33■□□□□ 0.53
HMGCLL1-202ENST00000308161 PDCL2Q8N4E4 241 aa18.33■□□□□ 0.53
HMGCLL1-202ENST00000308161 LRRC52Q8N7C0 313 aa18.33■□□□□ 0.53
HMGCLL1-202ENST00000308161 LEMD2Q8NC56 503 aa18.33■□□□□ 0.53
HMGCLL1-202ENST00000308161 ATOH1Q92858 354 aaPredicted RBP18.33■□□□□ 0.53
HMGCLL1-202ENST00000308161 CCDC127Q96BQ5 260 aa18.33■□□□□ 0.53
HMGCLL1-202ENST00000308161 ZSWIM3Q96MP5 696 aa18.33■□□□□ 0.53
HMGCLL1-202ENST00000308161 FNBP1Q96RU3 617 aa18.33■□□□□ 0.53
HMGCLL1-202ENST00000308161 LPIN3Q9BQK8 851 aa18.33■□□□□ 0.53
HMGCLL1-202ENST00000308161 PLA2G2FQ9BZM2 168 aa18.33■□□□□ 0.53
HMGCLL1-202ENST00000308161 GDPD2Q9HCC8 539 aa18.33■□□□□ 0.53
HMGCLL1-202ENST00000308161 KIAA1586Q9HCI6 787 aa18.33■□□□□ 0.53
HMGCLL1-202ENST00000308161 SIX4Q9UIU6 781 aa18.33■□□□□ 0.53
HMGCLL1-202ENST00000308161 MOSPD3O75425 235 aa18.32■□□□□ 0.52
HMGCLL1-202ENST00000308161 ECI2O75521 394 aa18.32■□□□□ 0.52
HMGCLL1-202ENST00000308161 TNNI1P19237 187 aa18.32■□□□□ 0.52
HMGCLL1-202ENST00000308161 ACAT1P24752 427 aaKnown RBP18.32■□□□□ 0.52
HMGCLL1-202ENST00000308161 SYKP43405 635 aa18.32■□□□□ 0.52
HMGCLL1-202ENST00000308161 GRM2Q14416 872 aa18.32■□□□□ 0.52
HMGCLL1-202ENST00000308161 VEPH1Q14D04 833 aa18.32■□□□□ 0.52
HMGCLL1-202ENST00000308161 TAF12Q16514 161 aa18.32■□□□□ 0.52
HMGCLL1-202ENST00000308161 DUOXA2Q1HG44 320 aa18.32■□□□□ 0.52
HMGCLL1-202ENST00000308161 LRRTM3Q86VH5 581 aa18.32■□□□□ 0.52
HMGCLL1-202ENST00000308161 DCP1BQ8IZD4 617 aaKnown RBP18.32■□□□□ 0.52
HMGCLL1-202ENST00000308161 FSIP1Q8NA03 581 aa18.32■□□□□ 0.52
HMGCLL1-202ENST00000308161 XXYLT1Q8NBI6 393 aa18.32■□□□□ 0.52
HMGCLL1-202ENST00000308161 SHKBP1Q8TBC3 707 aa18.32■□□□□ 0.52
HMGCLL1-202ENST00000308161 GIPC2Q8TF65 315 aa18.32■□□□□ 0.52
HMGCLL1-202ENST00000308161 PHOX2BQ99453 314 aa18.32■□□□□ 0.52
HMGCLL1-202ENST00000308161 ZFP14Q9HCL3 533 aa18.32■□□□□ 0.52
HMGCLL1-202ENST00000308161 DDX43Q9NXZ2 648 aaKnown RBP18.32■□□□□ 0.52
HMGCLL1-202ENST00000308161 KLRC4O43908 158 aa18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 CLSTN1O94985 981 aa18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 TUFMP49411 452 aaKnown RBP18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 NDUFA8P51970 172 aa18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 EPHA5P54756 1037 aa18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 MYL7Q01449 175 aa18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 MYO1EQ12965 1108 aa18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 KNOP1Q1ED39 458 aaKnown RBP18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 KMT5BQ4FZB7 885 aa18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 DNAJB7Q7Z6W7 309 aaPredicted RBP18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 ITIH5Q86UX2 942 aa18.31■□□□□ 0.52
HMGCLL1-202ENST00000308161 TMC8Q8IU68 726 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms