RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 TLK2Q86UE8 772 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 MRPS31Q92665 395 aaKnown RBP8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 HIST1H2AHQ96KK5 128 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 HIST1H2AJQ99878 128 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 TINF2Q9BSI4 451 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 H2AFJQ9BTM1 129 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 GLIS2Q9BZE0 524 aaPredicted RBP8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 PLEKHA4Q9H4M7 779 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 RUBCNLQ9H714 662 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 USP54Q70EL1 1684 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 CFAP69A5D8W1 941 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 EPHB3P54753 998 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 PPP6R3Q5H9R7 873 aaPredicted RBP8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 SARM1Q6SZW1 724 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 PIP4K2CQ8TBX8 421 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 APBB2Q92870 758 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 EML4Q9HC35 981 aaKnown RBP8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 UVRAGQ9P2Y5 699 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 PCDHB2Q9Y5E7 798 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 GOLGA8RI6L899 631 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 FGF19O95750 216 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 ARL4CP56559 192 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 HPCAP84074 193 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 AP1B1Q10567 949 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 MAP2K5Q13163 448 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 SYDE1Q6ZW31 735 aaPredicted RBP8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 SPON2Q9BUD6 331 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 ACTR5Q9H9F9 607 aaPredicted RBP8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 GTSE1Q9NYZ3 720 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 HSPBP1Q9NZL4 362 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 AIPL1Q9NZN9 384 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 TBX20Q9UMR3 447 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 UMODL1Q5DID0 1318 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 CASP7P55210 303 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 PSMC1P62191 440 aaKnown RBP8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 RBBP7Q16576 425 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 BBS9Q3SYG4 887 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 MAML1Q92585 1016 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 RMDN2Q96LZ7 410 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 FRMD8Q9BZ67 464 aaPredicted RBP8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 FAM124BQ9H5Z6 455 aaPredicted RBP8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 DNAJC12Q9UKB3 198 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 ITGA11Q9UKX5 1188 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 MYH14Q7Z406 1995 aaKnown RBP8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 SLC9A3R1O14745 358 aaPredicted RBP8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 SUPT3HO75486 399 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 APOA4P06727 396 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 ESRRAP11474 423 aaPredicted RBP8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 PTPRAP18433 802 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 ATP1A2P50993 1020 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 ETF1P62495 437 aaKnown RBP8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 MDM2Q00987 491 aaPredicted RBP8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 ZPBP2Q6X784 338 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 RHOT1Q8IXI2 618 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 UHMK1Q8TAS1 419 aaKnown RBP8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 HPDLQ96IR7 371 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 UROC1Q96N76 676 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 PPCSQ9HAB8 311 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 NFASCO94856 1347 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 HNRNPRO43390 633 aaKnown RBP8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 OR1G1P47890 313 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 APLP1P51693 650 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 ACVR2BQ13705 512 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 TMEM259Q4ZIN3 620 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 ZNF280DQ6N043 979 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 NECAB2Q7Z6G3 386 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 ENGASEQ8NFI3 743 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 FOXP3Q9BZS1 431 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 MPP6Q9NZW5 540 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 APOBEC2Q9Y235 224 aaKnown RBP8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 RTN3O95197 1032 aaPredicted RBP8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 ARHGEF7Q14155 803 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 WDR72Q3MJ13 1102 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 PABPC1LQ4VXU2 614 aaKnown RBP8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 NFRKBQ6P4R8 1299 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 CDKL3Q8IVW4 592 aaPredicted RBP8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 TRIM48Q8IWZ4 208 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 OTULINQ96BN8 352 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 RANBP17Q9H2T7 1088 aaKnown RBP8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 CHST12Q9NRB3 414 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 NHSQ6T4R5 1651 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 MAP2K2P36507 400 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 EFTUD2Q15029 972 aaKnown RBP eCLIP8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 CLEC17AQ6ZS10 378 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 TRIML2Q8N7C3 387 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 AGBL1Q96MI9 1066 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 EPB41L4AQ9HCS5 686 aaPredicted RBP8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 ANAPC7Q9UJX3 599 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 FAM170AA1A519 330 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 RTN2O75298 545 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 EPHB4P54760 987 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 NCALDP61601 193 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 PPARDQ03181 441 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 NFIAQ12857 509 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 CES5AQ6NT32 575 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 OSBPL10Q9BXB5 764 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 ZNF518BQ9C0D4 1074 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 NIF3L1Q9GZT8 377 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 AFF4Q9UHB7 1163 aaKnown RBP8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 FAM32AQ9Y421 112 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms