RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 ZSWIM1Q9BR11 485 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 TARS2Q9BW92 718 aaKnown RBP14.57□□□□□ -0.08
PRKCB-201ENST00000303531 GPBP1L1Q9HC44 474 aaPredicted RBP14.57□□□□□ -0.08
PRKCB-201ENST00000303531 PRDM5Q9NQX1 630 aaPredicted RBP14.57□□□□□ -0.08
PRKCB-201ENST00000303531 C1orf167Q5SNV9 1468 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 CYP11B2P19099 503 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 CCND1P24385 295 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 DCAF6Q58WW2 860 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 ACAD10Q6JQN1 1059 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 DDX50Q9BQ39 737 aaKnown RBP14.57□□□□□ -0.08
PRKCB-201ENST00000303531 ANKEF1Q9NU02 776 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 DUSP10Q9Y6W6 482 aa14.57□□□□□ -0.08
PRKCB-201ENST00000303531 HLA-DPA1P20036 260 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 GEMIN4P57678 1058 aaKnown RBP14.56□□□□□ -0.08
PRKCB-201ENST00000303531 EFCAB12Q6NXP0 572 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 C1orf131Q8NDD1 294 aaKnown RBP14.56□□□□□ -0.08
PRKCB-201ENST00000303531 PKD2L2Q9NZM6 624 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 KLC1Q07866 573 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 PRPF39Q86UA1 669 aaKnown RBP14.56□□□□□ -0.08
PRKCB-201ENST00000303531 CMTM5Q96DZ9 223 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 GTF3C4Q9UKN8 822 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 CPS1P31327 1500 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 IGF2BP3O00425 579 aaKnown RBP eCLIP14.56□□□□□ -0.08
PRKCB-201ENST00000303531 NDUFS3O75489 264 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 TRIM65Q6PJ69 517 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 CNPY4Q8N129 248 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 GRID1Q9ULK0 1009 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 ACADSBP45954 432 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 CHI3L2Q15782 390 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 ARMC2Q8NEN0 867 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 E2F7Q96AV8 911 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 L2HGDHQ9H9P8 463 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 MAFGO15525 162 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 FNTAP49354 379 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 MROH9Q5TGP6 573 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 IFNEQ86WN2 208 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 SRP72O76094 671 aaKnown RBP14.56□□□□□ -0.08
PRKCB-201ENST00000303531 TCN1P20061 433 aaPredicted RBP14.56□□□□□ -0.08
PRKCB-201ENST00000303531 KCNA3P22001 575 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 SLC25A41Q8N5S1 370 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 TMEM39BQ9GZU3 492 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.56□□□□□ -0.08
PRKCB-201ENST00000303531 RSPH10B2B2RC85 870 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 TNPO2O14787 897 aaKnown RBP14.56□□□□□ -0.08
PRKCB-201ENST00000303531 PYGLP06737 847 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 RSPH10BP0C881 870 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 MAPK7Q13164 816 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 POTEAQ6S8J7 498 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 RRM2BQ7LG56 351 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 TRPC7Q9HCX4 862 aa14.56□□□□□ -0.08
PRKCB-201ENST00000303531 SCAF8Q9UPN6 1271 aaKnown RBP14.56□□□□□ -0.08
PRKCB-201ENST00000303531 PTPRMP28827 1452 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 PJA2O43164 708 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 IPMKQ8NFU5 416 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 SERPINB12Q96P63 405 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 PIDD1Q9HB75 910 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 KLRK1P26718 216 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 DNAJC3Q13217 504 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 TRIP10Q15642 601 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 NR1H4Q96RI1 486 aaPredicted RBP14.55□□□□□ -0.08
PRKCB-201ENST00000303531 PRMT7Q9NVM4 692 aaPredicted RBP14.55□□□□□ -0.08
PRKCB-201ENST00000303531 NSMCE4AQ9NXX6 385 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 ITPK1Q13572 414 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 ZNF555Q8NEP9 628 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 SCFD2Q8WU76 684 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 HPDLQ96IR7 371 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 TAAR1Q96RJ0 339 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 SLC40A1Q9NP59 571 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 CAPN6Q9Y6Q1 641 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 TADA2AO75478 443 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 HIST1H2AGP0C0S8 130 aaPredicted RBP14.55□□□□□ -0.08
PRKCB-201ENST00000303531 HIST1H2ADP20671 130 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 KRT72Q14CN4 511 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 SV2CQ496J9 727 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 IER5Q5VY09 327 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 HIST1H2AHQ96KK5 128 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 HIST1H2AJQ99878 128 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 H2AFJQ9BTM1 129 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 FOXN3O00409 490 aaPredicted RBP14.55□□□□□ -0.08
PRKCB-201ENST00000303531 ADCY3O60266 1144 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 MED24O75448 989 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 SUPT3HO75486 399 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 SGPL1O95470 568 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 PLA2G4AP47712 749 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 CTCFP49711 727 aaPredicted RBP14.55□□□□□ -0.08
PRKCB-201ENST00000303531 TOB1P50616 345 aaPredicted RBP14.55□□□□□ -0.08
PRKCB-201ENST00000303531 NLRP11P59045 1033 aaKnown RBP14.55□□□□□ -0.08
PRKCB-201ENST00000303531 CUL2Q13617 745 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 DNAJC9Q8WXX5 260 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 SOX11P35716 441 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 IL31Q6EBC2 164 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 HPSEQ9Y251 543 aa14.55□□□□□ -0.08
PRKCB-201ENST00000303531 CPA2P48052 419 aa14.54□□□□□ -0.08
PRKCB-201ENST00000303531 KDM7AQ6ZMT4 941 aa14.54□□□□□ -0.08
PRKCB-201ENST00000303531 COL23A1Q86Y22 540 aaPredicted RBP14.54□□□□□ -0.08
PRKCB-201ENST00000303531 KIRREL3Q8IZU9 778 aa14.54□□□□□ -0.08
PRKCB-201ENST00000303531 SUPT3HB4E1H0 165 aa14.54□□□□□ -0.08
PRKCB-201ENST00000303531 EN1Q05925 392 aaPredicted RBP14.54□□□□□ -0.08
PRKCB-201ENST00000303531 TMEM154Q6P9G4 183 aa14.54□□□□□ -0.08
PRKCB-201ENST00000303531 PCYOX1LQ8NBM8 494 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms