RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 AHCYL2Q96HN2 611 aaKnown RBP8.17□□□□□ -1.1
SCN9A-201ENST00000303354 DACH2Q96NX9 599 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 P2RX7Q99572 595 aaKnown RBP8.17□□□□□ -1.1
SCN9A-201ENST00000303354 AGPAT5Q9NUQ2 364 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 PCMTD2Q9NV79 361 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 SELENONQ9NZV5 590 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 DTNAQ9Y4J8 743 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 SSH2Q76I76 1423 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 CFAP74Q9C0B2 1584 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 SGPL1O95470 568 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 GUCA1CO95843 209 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 P3H1Q32P28 736 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 FNDC3BQ53EP0 1204 aaKnown RBP8.17□□□□□ -1.1
SCN9A-201ENST00000303354 PTF1AQ7RTS3 328 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 SYT2Q8N9I0 419 aaPredicted RBP8.17□□□□□ -1.1
SCN9A-201ENST00000303354 CELF6Q96J87 481 aaKnown RBP8.17□□□□□ -1.1
SCN9A-201ENST00000303354 MAGOHP61326 146 aaKnown RBP8.17□□□□□ -1.1
SCN9A-201ENST00000303354 SF3B3Q15393 1217 aaKnown RBP8.17□□□□□ -1.1
SCN9A-201ENST00000303354 CXCL17Q6UXB2 119 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 ERO1BQ86YB8 467 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 KCTD10Q9H3F6 313 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 APPL1Q9UKG1 709 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 ALDH1A2O94788 518 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 BACE1P56817 501 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 CNTN2Q02246 1040 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 RHOT1Q8IXI2 618 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 NAT16Q8N8M0 369 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 RIN2Q8WYP3 895 aaPredicted RBP8.17□□□□□ -1.1
SCN9A-201ENST00000303354 CLIP3Q96DZ5 547 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 PTPN7P35236 360 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 KCNJ1P48048 391 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 NR1H3Q13133 447 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 KRT72Q14CN4 511 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 TMEM132BQ14DG7 1078 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 DGAT1O75907 488 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 EEF1DP29692 281 aaKnown RBP8.17□□□□□ -1.1
SCN9A-201ENST00000303354 ITPRIPL1Q6GPH6 555 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 KIAA1324Q6UXG2 1013 aaKnown RBP8.17□□□□□ -1.1
SCN9A-201ENST00000303354 DEFB118Q96PH6 123 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 RUSC1Q9BVN2 902 aa8.17□□□□□ -1.1
SCN9A-201ENST00000303354 EPHB3P54753 998 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 SGSM1Q2NKQ1 1148 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 C6orf10Q5SRN2 563 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 SDHAF4Q5VUM1 108 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 CHST13Q8NET6 341 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 EXOC4Q96A65 974 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 DDX43Q9NXZ2 648 aaKnown RBP8.16□□□□□ -1.1
SCN9A-201ENST00000303354 WARS2Q9UGM6 360 aaKnown RBP8.16□□□□□ -1.1
SCN9A-201ENST00000303354 PCDHB8Q9UN66 801 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 C4orf33Q8N1A6 199 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 LPPQ93052 612 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 NAF1Q96HR8 494 aaKnown RBP8.16□□□□□ -1.1
SCN9A-201ENST00000303354 MED15Q96RN5 788 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 BFARQ9NZS9 450 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 KPNA7A9QM74 516 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 PARNO95453 639 aaKnown RBP8.16□□□□□ -1.1
SCN9A-201ENST00000303354 ENO1P06733 434 aaKnown RBP8.16□□□□□ -1.1
SCN9A-201ENST00000303354 DARSP14868 501 aaKnown RBP8.16□□□□□ -1.1
SCN9A-201ENST00000303354 HERVK_113P62684 666 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 HHIPL2Q6UWX4 724 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 C7orf61Q8IZ16 206 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 IRX2Q9BZI1 471 aaPredicted RBP8.16□□□□□ -1.1
SCN9A-201ENST00000303354 C5orf58C9J3I9 102 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 F5H5T6 163 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 AXIN1O15169 862 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 FKBP9O95302 570 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 CTNNB1P35222 781 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 RAP1GDS1P52306 607 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 FKBP9P1Q75LS8 142 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 ADGRF2Q8IZF7 708 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 FAM71DQ8N9W8 422 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 OR2W6PQ8NHA6 318 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 LRRN4Q8WUT4 740 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 HES6Q96HZ4 224 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 OSBPL3Q9H4L5 887 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 Q9H521 79 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 VPS28Q9UK41 221 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 PPM1LQ5SGD2 360 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 TRIM42Q8IWZ5 723 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 CENPKQ9BS16 269 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 CYP4F12Q9HCS2 524 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 KRT37O76014 449 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 CPSF4O95639 269 aaKnown RBP8.16□□□□□ -1.1
SCN9A-201ENST00000303354 CXCL8P10145 99 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 WASP42768 502 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 IPCEF1Q8WWN9 437 aaPredicted RBP8.16□□□□□ -1.1
SCN9A-201ENST00000303354 PXMP2Q9NR77 195 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 ZBTB39O15060 712 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 MMEP08473 750 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 KRT7P08729 469 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 NAA30Q147X3 362 aaPredicted RBP8.16□□□□□ -1.1
SCN9A-201ENST00000303354 PGS1Q32NB8 556 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 MED8Q96G25 268 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 MRFAP1L1Q96HT8 127 aa8.16□□□□□ -1.1
SCN9A-201ENST00000303354 MSH4O15457 936 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 SYN1P17600 705 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 CDH8P55286 799 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 FLOT2Q14254 428 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 TKFCQ3LXA3 575 aa8.15□□□□□ -1.1
SCN9A-201ENST00000303354 SPATA18Q8TC71 538 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms