RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 PTP4A2Q12974 167 aa15.46■□□□□ 0.06
SMG8-201ENST00000300917 TMEM35BQ8NCS4 154 aa15.46■□□□□ 0.06
SMG8-201ENST00000300917 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.46■□□□□ 0.06
SMG8-201ENST00000300917 DDX27Q96GQ7 796 aaKnown RBP15.46■□□□□ 0.06
SMG8-201ENST00000300917 KATNBL1Q9H079 304 aa15.46■□□□□ 0.06
SMG8-201ENST00000300917 C10orf88Q9H8K7 445 aa15.46■□□□□ 0.06
SMG8-201ENST00000300917 KLK14Q9P0G3 267 aa15.46■□□□□ 0.06
SMG8-201ENST00000300917 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.46■□□□□ 0.06
SMG8-201ENST00000300917 PPFIA4O75335 1185 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 GRAP2O75791 330 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 ITGBL1O95965 494 aaPredicted RBP15.45■□□□□ 0.06
SMG8-201ENST00000300917 MMP8P22894 467 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 TNFAIP2Q03169 654 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 SF3A3Q12874 501 aaKnown RBP eCLIP15.45■□□□□ 0.06
SMG8-201ENST00000300917 MARCH8Q5T0T0 291 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 KIF12Q96FN5 646 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 HEXIM2Q96MH2 286 aaKnown RBP15.45■□□□□ 0.06
SMG8-201ENST00000300917 LPIN3Q9BQK8 851 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 MRPL47Q9HD33 250 aaKnown RBP15.45■□□□□ 0.06
SMG8-201ENST00000300917 AVENQ9NQS1 362 aaPredicted RBP15.45■□□□□ 0.06
SMG8-201ENST00000300917 PARVAQ9NVD7 372 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 SNTG2Q9NY99 539 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 PPEF2O14830 753 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 ECEL1O95672 775 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 ACTN2P35609 894 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 ZNF844Q08AG5 666 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 ZDHHC24Q6UX98 284 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 B4GALNT4Q76KP1 1039 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.45■□□□□ 0.06
SMG8-201ENST00000300917 EXOC8Q8IYI6 725 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 C12orf29Q8N999 325 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 SEMA4AQ9H3S1 761 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 FLRT1Q9NZU1 646 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 SAE1Q9UBE0 346 aaPredicted RBP15.45■□□□□ 0.06
SMG8-201ENST00000300917 PCSK1NQ9UHG2 260 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 DOCK3Q8IZD9 2030 aa15.45■□□□□ 0.06
SMG8-201ENST00000300917 AKAP5P24588 427 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 PTPN20Q4JDL3 420 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 CATSPER4Q7RTX7 472 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 JOSD2Q8TAC2 188 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 TRIM11Q96F44 468 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 EIF2AQ9BY44 585 aaKnown RBP15.44■□□□□ 0.06
SMG8-201ENST00000300917 NMRK2Q9NPI5 230 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 GRHL1Q9NZI5 618 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 RSPH14Q9UHP6 348 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 ASAP2O43150 1006 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 HCRTO43612 131 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 STRNO43815 780 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 B4GALT4O60513 344 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 TSPAN1O60635 241 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 KRT1P04264 644 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 MYZAPP0CAP1 466 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 MYBL1P10243 752 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 RFC1P35251 1148 aaPredicted RBP15.44■□□□□ 0.06
SMG8-201ENST00000300917 ZNF132P52740 706 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 ZNF252P-AS1Q0IIN9 211 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 DHX34Q14147 1143 aaKnown RBP15.44■□□□□ 0.06
SMG8-201ENST00000300917 TMEM132DQ14C87 1099 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 LRRC31Q6UY01 552 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 ILDR2Q71H61 639 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 HPDLQ96IR7 371 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 PARK7Q99497 189 aaKnown RBP15.44■□□□□ 0.06
SMG8-201ENST00000300917 CAPS2Q9BXY5 557 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 CEP83Q9Y592 693 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 GCLCP48506 637 aaPredicted RBP15.44■□□□□ 0.06
SMG8-201ENST00000300917 RGS7P49802 495 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 MTM1Q13496 603 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 TCEAL1Q15170 157 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 DGKDQ16760 1214 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 DUSP28Q4G0W2 176 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 HP1BP3Q5SSJ5 553 aaPredicted RBP15.44■□□□□ 0.06
SMG8-201ENST00000300917 PLEKHA7Q6IQ23 1121 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 TRIM72Q6ZMU5 477 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 GSTA5Q7RTV2 222 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 PHF13Q86YI8 300 aaPredicted RBP15.44■□□□□ 0.06
SMG8-201ENST00000300917 RHOT1Q8IXI2 618 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 PLVAPQ9BX97 442 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 OSBPL8Q9BZF1 889 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 ELOVL4Q9GZR5 314 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 ZDHHC18Q9NUE0 388 aa15.44■□□□□ 0.06
SMG8-201ENST00000300917 NOVA2Q9UNW9 492 aaKnown RBP15.44■□□□□ 0.06
SMG8-201ENST00000300917 LRRD1A4D1F6 860 aa15.43■□□□□ 0.06
SMG8-201ENST00000300917 M0QYV0 167 aa15.43■□□□□ 0.06
SMG8-201ENST00000300917 MAGEB2O15479 319 aa15.43■□□□□ 0.06
SMG8-201ENST00000300917 AP3M2P53677 418 aa15.43■□□□□ 0.06
SMG8-201ENST00000300917 PSMC1P62191 440 aaKnown RBP15.43■□□□□ 0.06
SMG8-201ENST00000300917 SURF1Q15526 300 aa15.43■□□□□ 0.06
SMG8-201ENST00000300917 DNAJB3Q8WWF6 145 aa15.43■□□□□ 0.06
SMG8-201ENST00000300917 ACAP3Q96P50 834 aa15.43■□□□□ 0.06
SMG8-201ENST00000300917 CPXM1Q96SM3 734 aa15.43■□□□□ 0.06
SMG8-201ENST00000300917 FAM49BQ9NUQ9 324 aa15.43■□□□□ 0.06
SMG8-201ENST00000300917 IGF2BP3O00425 579 aaKnown RBP eCLIP15.43■□□□□ 0.06
SMG8-201ENST00000300917 ZNF157P51786 506 aaPredicted RBP15.43■□□□□ 0.06
SMG8-201ENST00000300917 RAD23BP54727 409 aa15.43■□□□□ 0.06
SMG8-201ENST00000300917 PLCB3Q01970 1234 aa15.43■□□□□ 0.06
SMG8-201ENST00000300917 CST9Q5W186 159 aa15.43■□□□□ 0.06
SMG8-201ENST00000300917 MFSD7Q6UXD7 560 aa15.43■□□□□ 0.06
SMG8-201ENST00000300917 MREGQ8N565 214 aa15.43■□□□□ 0.06
SMG8-201ENST00000300917 UBR7Q8N806 425 aa15.43■□□□□ 0.06
SMG8-201ENST00000300917 C18orf25Q96B23 403 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms