RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 NMD3Q96D46 503 aaKnown RBP13.72□□□□□ -0.21
TVP23A-201ENST00000299866 EBF3Q9H4W6 596 aa13.72□□□□□ -0.21
TVP23A-201ENST00000299866 DAGLAQ9Y4D2 1042 aa13.72□□□□□ -0.21
TVP23A-201ENST00000299866 SPATA31A5Q5VU36 1347 aa13.72□□□□□ -0.21
TVP23A-201ENST00000299866 SPATA31A6Q5VVP1 1343 aa13.72□□□□□ -0.21
TVP23A-201ENST00000299866 SPATA31A7Q8IWB4 1347 aa13.72□□□□□ -0.21
TVP23A-201ENST00000299866 DDX39AO00148 427 aaKnown RBP13.72□□□□□ -0.21
TVP23A-201ENST00000299866 SHMT1P34896 483 aa13.72□□□□□ -0.21
TVP23A-201ENST00000299866 GEMIN4P57678 1058 aaKnown RBP13.72□□□□□ -0.21
TVP23A-201ENST00000299866 DEUP1Q05D60 604 aa13.72□□□□□ -0.21
TVP23A-201ENST00000299866 CLEC16AQ2KHT3 1053 aa13.72□□□□□ -0.21
TVP23A-201ENST00000299866 C6orf163Q5TEZ5 329 aa13.72□□□□□ -0.21
TVP23A-201ENST00000299866 CEP128Q6ZU80 1094 aa13.72□□□□□ -0.21
TVP23A-201ENST00000299866 ST13P4Q8IZP2 240 aaPredicted RBP13.72□□□□□ -0.21
TVP23A-201ENST00000299866 XXYLT1Q8NBI6 393 aa13.72□□□□□ -0.21
TVP23A-201ENST00000299866 LINC00116Q8NCU8 138 aa13.72□□□□□ -0.21
TVP23A-201ENST00000299866 OXNAD1Q96HP4 312 aaPredicted RBP13.72□□□□□ -0.21
TVP23A-201ENST00000299866 PI4K2AQ9BTU6 479 aa13.72□□□□□ -0.21
TVP23A-201ENST00000299866 TOPORSQ9NS56 1045 aaPredicted RBP13.72□□□□□ -0.21
TVP23A-201ENST00000299866 PKD2L1Q9P0L9 805 aa13.72□□□□□ -0.21
TVP23A-201ENST00000299866 A8MXQ7 604 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 ATP2A1O14983 1001 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 SLC1A1P43005 524 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 CDK7P50613 346 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 CDC16Q13042 620 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 C1orf146Q5VVC0 180 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 CENPUQ71F23 418 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 SLC9A9Q8IVB4 645 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 SCUBE1Q8IWY4 988 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 MCOLN2Q8IZK6 566 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 ZNF276Q8N554 614 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 RANBP17Q9H2T7 1088 aaKnown RBP13.71□□□□□ -0.21
TVP23A-201ENST00000299866 TUFT1Q9NNX1 390 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 PPARGC1AQ9UBK2 798 aaKnown RBP13.71□□□□□ -0.21
TVP23A-201ENST00000299866 PPM1HQ9ULR3 514 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.71□□□□□ -0.21
TVP23A-201ENST00000299866 PLSCR1O15162 318 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 GYS1P13807 737 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 YY1P25490 414 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 GPX6P59796 221 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 MARK2Q7KZI7 788 aaKnown RBP13.71□□□□□ -0.21
TVP23A-201ENST00000299866 CBWD2Q8IUF1 395 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 PASD1Q8IV76 773 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 DAW1Q8N136 415 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 RBM15BQ8NDT2 890 aaKnown RBP13.71□□□□□ -0.21
TVP23A-201ENST00000299866 HIC2Q96JB3 615 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 FAM111AQ96PZ2 611 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 PANX3Q96QZ0 392 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 NACC1Q96RE7 527 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 WDR18Q9BV38 432 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 RHBDL2Q9NX52 303 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 SLC24A2Q9UI40 661 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 PHF24Q9UPV7 400 aa13.71□□□□□ -0.21
TVP23A-201ENST00000299866 ATRNL1Q5VV63 1379 aa13.71□□□□□ -0.22
TVP23A-201ENST00000299866 PLIN4Q96Q06 1357 aa13.71□□□□□ -0.22
TVP23A-201ENST00000299866 GRIN3BO60391 1043 aa13.71□□□□□ -0.22
TVP23A-201ENST00000299866 GAS7O60861 476 aa13.71□□□□□ -0.22
TVP23A-201ENST00000299866 ADRB2P07550 413 aa13.71□□□□□ -0.22
TVP23A-201ENST00000299866 USP46P62068 366 aa13.71□□□□□ -0.22
TVP23A-201ENST00000299866 AP2B1P63010 937 aa13.71□□□□□ -0.22
TVP23A-201ENST00000299866 MTMR2Q13614 643 aa13.71□□□□□ -0.22
TVP23A-201ENST00000299866 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.71□□□□□ -0.22
TVP23A-201ENST00000299866 ISLR2Q6UXK2 745 aa13.71□□□□□ -0.22
TVP23A-201ENST00000299866 RASSF3Q86WH2 238 aa13.71□□□□□ -0.22
TVP23A-201ENST00000299866 RHOT1Q8IXI2 618 aa13.71□□□□□ -0.22
TVP23A-201ENST00000299866 DDX1Q92499 740 aaKnown RBP13.71□□□□□ -0.22
TVP23A-201ENST00000299866 PAFAH2Q99487 392 aa13.71□□□□□ -0.22
TVP23A-201ENST00000299866 FOXP3Q9BZS1 431 aa13.71□□□□□ -0.22
TVP23A-201ENST00000299866 C10orf88Q9H8K7 445 aa13.71□□□□□ -0.22
TVP23A-201ENST00000299866 DDX43Q9NXZ2 648 aaKnown RBP13.71□□□□□ -0.22
TVP23A-201ENST00000299866 UBE4BO95155 1302 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 ALOX15BO15296 676 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 P4HA2O15460 535 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 LPXNO60711 386 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 GPSM2P81274 684 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 LSAMPQ13449 338 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 PABPC1LQ4VXU2 614 aaKnown RBP13.7□□□□□ -0.22
TVP23A-201ENST00000299866 C3orf62Q6ZUJ4 267 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 RAPH1Q70E73 1250 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 SLF2Q8IX21 1173 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 TAS1R2Q8TE23 839 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 PYROXD1Q8WU10 500 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 ACSF2Q96CM8 615 aaPredicted RBP13.7□□□□□ -0.22
TVP23A-201ENST00000299866 C11orf70Q9BRQ4 267 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 MMADHCQ9H3L0 296 aaPredicted RBP13.7□□□□□ -0.22
TVP23A-201ENST00000299866 DNAAF2Q9NVR5 837 aaKnown RBP13.7□□□□□ -0.22
TVP23A-201ENST00000299866 CLIC5Q9NZA1 410 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 HNRNPRO43390 633 aaKnown RBP13.7□□□□□ -0.22
TVP23A-201ENST00000299866 PROSCO94903 275 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 OR6B1O95007 311 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 FOSP01100 380 aaPredicted RBP13.7□□□□□ -0.22
TVP23A-201ENST00000299866 DLDP09622 509 aaKnown RBP13.7□□□□□ -0.22
TVP23A-201ENST00000299866 KITP10721 976 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 MYBPC3Q14896 1274 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 DDB1Q16531 1140 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 TREML1Q86YW5 311 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 HELQQ8TDG4 1101 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 NT5C1BQ96P26 610 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 ARHGEF4Q9NR80 690 aa13.7□□□□□ -0.22
TVP23A-201ENST00000299866 RABGEF1Q9UJ41 708 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms