RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 KCNMA1Q12791 1236 aa15.49■□□□□ 0.07
SCN3B-201ENST00000299333 NAB2Q15742 525 aa15.49■□□□□ 0.07
SCN3B-201ENST00000299333 UGP2Q16851 508 aa15.49■□□□□ 0.07
SCN3B-201ENST00000299333 GPD1LQ8N335 351 aa15.49■□□□□ 0.07
SCN3B-201ENST00000299333 ASAP3Q8TDY4 903 aa15.49■□□□□ 0.07
SCN3B-201ENST00000299333 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.49■□□□□ 0.07
SCN3B-201ENST00000299333 UBOX5O94941 541 aa15.49■□□□□ 0.07
SCN3B-201ENST00000299333 SERPIND1P05546 499 aa15.49■□□□□ 0.07
SCN3B-201ENST00000299333 MCAMP43121 646 aa15.49■□□□□ 0.07
SCN3B-201ENST00000299333 CCNA1P78396 465 aa15.49■□□□□ 0.07
SCN3B-201ENST00000299333 USPL1Q5W0Q7 1092 aa15.49■□□□□ 0.07
SCN3B-201ENST00000299333 RBAKQ9NYW8 714 aaPredicted RBP15.49■□□□□ 0.07
SCN3B-201ENST00000299333 CD274Q9NZQ7 290 aa15.49■□□□□ 0.07
SCN3B-201ENST00000299333 COMTP21964 271 aa15.49■□□□□ 0.07
SCN3B-201ENST00000299333 IL12RB1P42701 662 aa15.49■□□□□ 0.07
SCN3B-201ENST00000299333 SLC16A1P53985 500 aa15.49■□□□□ 0.07
SCN3B-201ENST00000299333 ARMC4Q5T2S8 1044 aa15.49■□□□□ 0.07
SCN3B-201ENST00000299333 REXO1L1PQ8IX06 675 aa15.49■□□□□ 0.07
SCN3B-201ENST00000299333 MAGEB18Q96M61 343 aa15.49■□□□□ 0.07
SCN3B-201ENST00000299333 TOPORSQ9NS56 1045 aaPredicted RBP15.49■□□□□ 0.07
SCN3B-201ENST00000299333 BAIAP3O94812 1187 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 KLK7P49862 253 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 ATP2C1P98194 919 aaPredicted RBP15.48■□□□□ 0.07
SCN3B-201ENST00000299333 CNGA2Q16280 664 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 SGSM1Q2NKQ1 1148 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 SGO1Q5FBB7 561 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 MIGA2Q7L4E1 593 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 RTL3Q8N8U3 475 aaKnown RBP15.48■□□□□ 0.07
SCN3B-201ENST00000299333 C19orf18Q8NEA5 215 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 BEST2Q8NFU1 509 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 ZNF668Q96K58 619 aaPredicted RBP15.48■□□□□ 0.07
SCN3B-201ENST00000299333 RBBP8Q99708 897 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 STK33Q9BYT3 514 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 TRPC7Q9HCX4 862 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 ATP10AO60312 1499 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 ATP7BP35670 1465 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 A8MXQ7 604 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 GOLGA8TH3BQL2 631 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 GUCY1B2O75343 617 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 DDX5P17844 614 aaKnown RBP15.48■□□□□ 0.07
SCN3B-201ENST00000299333 PPP3CCP48454 512 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 TPI1P60174 286 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 PSMC6P62333 389 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 PPIDQ08752 370 aaKnown RBP15.48■□□□□ 0.07
SCN3B-201ENST00000299333 ACCSLQ4AC99 568 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 CLEC4GQ6UXB4 293 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 MTDHQ86UE4 582 aaKnown RBP15.48■□□□□ 0.07
SCN3B-201ENST00000299333 FAM160B2Q86V87 743 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 MB21D2Q8IYB1 491 aaPredicted RBP15.48■□□□□ 0.07
SCN3B-201ENST00000299333 MCEEQ96PE7 176 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 TMEM47Q9BQJ4 181 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 FAM129AQ9BZQ8 928 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 SPRTNQ9H040 489 aaPredicted RBP15.48■□□□□ 0.07
SCN3B-201ENST00000299333 PI4KBQ9UBF8 816 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 APEX2Q9UBZ4 518 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 ADGRA3Q8IWK6 1321 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 TRIM49D1C9J1S8 452 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 KPNA4O00629 521 aaPredicted RBP15.48■□□□□ 0.07
SCN3B-201ENST00000299333 TDP2O95551 362 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 UCHL3P15374 230 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 REXO4Q9GZR2 422 aaKnown RBP15.48■□□□□ 0.07
SCN3B-201ENST00000299333 H3BQF6 201 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 GYPCP04921 128 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 HIST1H2AGP0C0S8 130 aaPredicted RBP15.48■□□□□ 0.07
SCN3B-201ENST00000299333 HIST1H2ADP20671 130 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 ADARP55265 1226 aaKnown RBP15.48■□□□□ 0.07
SCN3B-201ENST00000299333 STX5Q13190 355 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 PACS2Q86VP3 889 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.48■□□□□ 0.07
SCN3B-201ENST00000299333 HIST1H2AHQ96KK5 128 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 FAM20AQ96MK3 541 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 HIST1H2AJQ99878 128 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 H2AFJQ9BTM1 129 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 POLIQ9UNA4 740 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 AHCYL1O43865 530 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 SFSWAPQ12872 951 aaKnown RBP15.48■□□□□ 0.07
SCN3B-201ENST00000299333 APPL2Q8NEU8 664 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 TADA1Q96BN2 335 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 C19orf60Q96EN9 201 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 ZFP42Q96MM3 310 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 TMEM79Q9BSE2 394 aa15.48■□□□□ 0.07
SCN3B-201ENST00000299333 THUMPD3Q9BV44 507 aaKnown RBP15.48■□□□□ 0.07
SCN3B-201ENST00000299333 DHX36Q9H2U1 1008 aaKnown RBP15.48■□□□□ 0.07
SCN3B-201ENST00000299333 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.48■□□□□ 0.07
SCN3B-201ENST00000299333 NFKBIL1Q9UBC1 381 aaPredicted RBP15.48■□□□□ 0.07
SCN3B-201ENST00000299333 ATMINO43313 823 aaPredicted RBP15.47■□□□□ 0.07
SCN3B-201ENST00000299333 SPAG6O75602 509 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 BCL10O95999 233 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 AKIRIN2Q53H80 203 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 FOXP3Q9BZS1 431 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 DBNDD1Q9H9R9 158 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 TMBIM4Q9HC24 238 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 ZHX2Q9Y6X8 837 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 PIPSLA2A3N6 862 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 NMT1P30419 496 aaKnown RBP15.47■□□□□ 0.07
SCN3B-201ENST00000299333 BNC2Q6ZN30 1099 aaPredicted RBP15.47■□□□□ 0.07
SCN3B-201ENST00000299333 ZCCHC7Q8N3Z6 543 aaKnown RBP15.47■□□□□ 0.07
SCN3B-201ENST00000299333 PLEKHA5Q9HAU0 1116 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 PKP3Q9Y446 797 aa15.47■□□□□ 0.07
SCN3B-201ENST00000299333 RPAP1Q9BWH6 1393 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms