RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 RTP2Q5QGT7 225 aa22.74■■□□□ 1.23
SMCO4-201ENST00000298966 FILIP1Q7Z7B0 1213 aa22.74■■□□□ 1.23
SMCO4-201ENST00000298966 GLIS3Q8NEA6 775 aa22.74■■□□□ 1.23
SMCO4-201ENST00000298966 RABGGTAQ92696 567 aa22.74■■□□□ 1.23
SMCO4-201ENST00000298966 RTKNQ9BST9 563 aa22.74■■□□□ 1.23
SMCO4-201ENST00000298966 XPO4Q9C0E2 1151 aaKnown RBP22.74■■□□□ 1.23
SMCO4-201ENST00000298966 GPRC5CQ9NQ84 441 aa22.74■■□□□ 1.23
SMCO4-201ENST00000298966 ZMYM2Q9UBW7 1377 aa22.74■■□□□ 1.23
SMCO4-201ENST00000298966 CCL16O15467 120 aa22.73■■□□□ 1.23
SMCO4-201ENST00000298966 TBC1D4O60343 1298 aa22.73■■□□□ 1.23
SMCO4-201ENST00000298966 LILRB5O75023 590 aa22.73■■□□□ 1.23
SMCO4-201ENST00000298966 PTMAP06454 111 aaKnown RBP22.73■■□□□ 1.23
SMCO4-201ENST00000298966 CD72P21854 359 aa22.73■■□□□ 1.23
SMCO4-201ENST00000298966 IFNLR1Q8IU57 520 aaPredicted RBP22.73■■□□□ 1.23
SMCO4-201ENST00000298966 NELFCDQ8IXH7 590 aa22.73■■□□□ 1.23
SMCO4-201ENST00000298966 C12orf56Q8IXR9 622 aa22.73■■□□□ 1.23
SMCO4-201ENST00000298966 GSTCDQ8NEC7 633 aa22.73■■□□□ 1.23
SMCO4-201ENST00000298966 KXD1Q9BQD3 176 aa22.73■■□□□ 1.23
SMCO4-201ENST00000298966 PARP2Q9UGN5 583 aa22.73■■□□□ 1.23
SMCO4-201ENST00000298966 A0A1B0GTH6 734 aa22.72■■□□□ 1.23
SMCO4-201ENST00000298966 CCDC169A6NNP5 214 aa22.72■■□□□ 1.23
SMCO4-201ENST00000298966 ARF4P18085 180 aaPredicted RBP22.72■■□□□ 1.23
SMCO4-201ENST00000298966 MARSP56192 900 aaKnown RBP22.72■■□□□ 1.23
SMCO4-201ENST00000298966 POU5F1BQ06416 359 aa22.72■■□□□ 1.23
SMCO4-201ENST00000298966 PSMD5Q16401 504 aa22.72■■□□□ 1.23
SMCO4-201ENST00000298966 TPRG1Q6ZUI0 275 aa22.72■■□□□ 1.23
SMCO4-201ENST00000298966 CEP57Q86XR8 500 aa22.72■■□□□ 1.23
SMCO4-201ENST00000298966 SYCP3Q8IZU3 236 aa22.72■■□□□ 1.23
SMCO4-201ENST00000298966 TMEM161BQ8NDZ6 487 aa22.72■■□□□ 1.23
SMCO4-201ENST00000298966 ITFG1Q8TB96 612 aa22.72■■□□□ 1.23
SMCO4-201ENST00000298966 PIK3R5Q8WYR1 880 aa22.72■■□□□ 1.23
SMCO4-201ENST00000298966 NELL1Q92832 810 aa22.72■■□□□ 1.23
SMCO4-201ENST00000298966 CLDN23Q96B33 292 aa22.72■■□□□ 1.23
SMCO4-201ENST00000298966 CLSTN3Q9BQT9 956 aa22.72■■□□□ 1.23
SMCO4-201ENST00000298966 TTPALQ9BTX7 342 aa22.72■■□□□ 1.23
SMCO4-201ENST00000298966 MKNK1Q9BUB5 465 aa22.72■■□□□ 1.23
SMCO4-201ENST00000298966 C2orf40Q9H1Z8 148 aa22.72■■□□□ 1.23
SMCO4-201ENST00000298966 KLK14Q9P0G3 267 aa22.72■■□□□ 1.23
SMCO4-201ENST00000298966 ARHGAP28Q9P2N2 729 aa22.72■■□□□ 1.23
SMCO4-201ENST00000298966 GMEB2Q9UKD1 530 aa22.72■■□□□ 1.23
SMCO4-201ENST00000298966 CHD8Q9HCK8 2581 aa22.71■■□□□ 1.23
SMCO4-201ENST00000298966 SLC16A3O15427 465 aaKnown RBP22.71■■□□□ 1.23
SMCO4-201ENST00000298966 NPTXRO95502 500 aa22.71■■□□□ 1.23
SMCO4-201ENST00000298966 TARSP26639 723 aaKnown RBP22.71■■□□□ 1.23
SMCO4-201ENST00000298966 HOXD13P35453 343 aa22.71■■□□□ 1.23
SMCO4-201ENST00000298966 EFNA5P52803 228 aa22.71■■□□□ 1.23
SMCO4-201ENST00000298966 MBTD1Q05BQ5 628 aa22.71■■□□□ 1.23
SMCO4-201ENST00000298966 PPP2R3AQ06190 1150 aa22.71■■□□□ 1.23
SMCO4-201ENST00000298966 AMHR2Q16671 573 aa22.71■■□□□ 1.23
SMCO4-201ENST00000298966 FAM171A1Q5VUB5 890 aa22.71■■□□□ 1.23
SMCO4-201ENST00000298966 SLC27A1Q6PCB7 646 aa22.71■■□□□ 1.23
SMCO4-201ENST00000298966 SLC9A9Q8IVB4 645 aa22.71■■□□□ 1.23
SMCO4-201ENST00000298966 MAP4K3Q8IVH8 894 aa22.71■■□□□ 1.23
SMCO4-201ENST00000298966 CNOT6LQ96LI5 555 aaKnown RBP22.71■■□□□ 1.23
SMCO4-201ENST00000298966 TMEM134Q9H6X4 195 aa22.71■■□□□ 1.23
SMCO4-201ENST00000298966 IMPACTQ9P2X3 320 aa22.71■■□□□ 1.23
SMCO4-201ENST00000298966 MRPS17Q9Y2R5 130 aaKnown RBP22.71■■□□□ 1.23
SMCO4-201ENST00000298966 DCDC2BA2VCK2 349 aa22.7■■□□□ 1.22
SMCO4-201ENST00000298966 SLC16A4O15374 487 aa22.7■■□□□ 1.22
SMCO4-201ENST00000298966 GLRA2P23416 452 aa22.7■■□□□ 1.22
SMCO4-201ENST00000298966 NR2F2P24468 414 aa22.7■■□□□ 1.22
SMCO4-201ENST00000298966 RPS9P46781 194 aaKnown RBP22.7■■□□□ 1.22
SMCO4-201ENST00000298966 ADAM9Q13443 819 aa22.7■■□□□ 1.22
SMCO4-201ENST00000298966 TUSC3Q13454 348 aa22.7■■□□□ 1.22
SMCO4-201ENST00000298966 ZC2HC1CQ53FD0 456 aaPredicted RBP22.7■■□□□ 1.22
SMCO4-201ENST00000298966 PDXDC1Q6P996 788 aa22.7■■□□□ 1.22
SMCO4-201ENST00000298966 TSSK4Q6SA08 328 aa22.7■■□□□ 1.22
SMCO4-201ENST00000298966 APTXQ7Z2E3 356 aaKnown RBP22.7■■□□□ 1.22
SMCO4-201ENST00000298966 IRF2BP1Q8IU81 584 aa22.7■■□□□ 1.22
SMCO4-201ENST00000298966 DRC7Q8IY82 874 aa22.7■■□□□ 1.22
SMCO4-201ENST00000298966 DEPTORQ8TB45 409 aa22.7■■□□□ 1.22
SMCO4-201ENST00000298966 LNX1Q8TBB1 728 aaPredicted RBP22.7■■□□□ 1.22
SMCO4-201ENST00000298966 HASPINQ8TF76 798 aa22.7■■□□□ 1.22
SMCO4-201ENST00000298966 FAM126AQ9BYI3 521 aaPredicted RBP22.7■■□□□ 1.22
SMCO4-201ENST00000298966 METTL14Q9HCE5 456 aaKnown RBP22.7■■□□□ 1.22
SMCO4-201ENST00000298966 POLD4Q9HCU8 107 aa22.7■■□□□ 1.22
SMCO4-201ENST00000298966 CACNG4Q9UBN1 327 aa22.7■■□□□ 1.22
SMCO4-201ENST00000298966 TBX20Q9UMR3 447 aa22.7■■□□□ 1.22
SMCO4-201ENST00000298966 NR3C1P04150 777 aa22.69■■□□□ 1.22
SMCO4-201ENST00000298966 POU2F2P09086 479 aa22.69■■□□□ 1.22
SMCO4-201ENST00000298966 STRN3Q13033 797 aa22.69■■□□□ 1.22
SMCO4-201ENST00000298966 CAPSQ13938 189 aa22.69■■□□□ 1.22
SMCO4-201ENST00000298966 KRT31Q15323 416 aa22.69■■□□□ 1.22
SMCO4-201ENST00000298966 PABPC1LQ4VXU2 614 aaKnown RBP22.69■■□□□ 1.22
SMCO4-201ENST00000298966 ZNF852Q6ZMS4 543 aa22.69■■□□□ 1.22
SMCO4-201ENST00000298966 CDR2LQ86X02 465 aaPredicted RBP22.69■■□□□ 1.22
SMCO4-201ENST00000298966 NPAS3Q8IXF0 933 aa22.69■■□□□ 1.22
SMCO4-201ENST00000298966 SLC7A14Q8TBB6 771 aa22.69■■□□□ 1.22
SMCO4-201ENST00000298966 BSNDQ8WZ55 320 aa22.69■■□□□ 1.22
SMCO4-201ENST00000298966 PAAF1Q9BRP4 392 aa22.69■■□□□ 1.22
SMCO4-201ENST00000298966 NFKBIZQ9BYH8 718 aa22.69■■□□□ 1.22
SMCO4-201ENST00000298966 PRMT8Q9NR22 394 aaPredicted RBP22.69■■□□□ 1.22
SMCO4-201ENST00000298966 RAB23Q9ULC3 237 aa22.69■■□□□ 1.22
SMCO4-201ENST00000298966 NOTCH4Q99466 2003 aa22.69■■□□□ 1.22
SMCO4-201ENST00000298966 KIAA0391O15091 583 aaKnown RBP22.68■■□□□ 1.22
SMCO4-201ENST00000298966 TGFB1I1O43294 461 aa22.68■■□□□ 1.22
SMCO4-201ENST00000298966 COPB1P53618 953 aaKnown RBP22.68■■□□□ 1.22
SMCO4-201ENST00000298966 ELAVL2Q12926 359 aaKnown RBP22.68■■□□□ 1.22
SMCO4-201ENST00000298966 NR1I3Q14994 352 aa22.68■■□□□ 1.22
SMCO4-201ENST00000298966 ST3GAL2Q16842 350 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms