RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 SHKBP1Q8TBC3 707 aa10.13□□□□□ -0.79
CNOT9-202ENST00000295701 ZSCAN18Q8TBC5 510 aaPredicted RBP10.13□□□□□ -0.79
CNOT9-202ENST00000295701 FAM3CQ92520 227 aa10.13□□□□□ -0.79
CNOT9-202ENST00000295701 ZNF512Q96ME7 567 aaPredicted RBP10.13□□□□□ -0.79
CNOT9-202ENST00000295701 PGLYRP2Q96PD5 576 aa10.13□□□□□ -0.79
CNOT9-202ENST00000295701 PNMA5Q96PV4 448 aa10.13□□□□□ -0.79
CNOT9-202ENST00000295701 NELL2Q99435 816 aa10.13□□□□□ -0.79
CNOT9-202ENST00000295701 LLPHQ9BRT6 129 aaKnown RBP10.13□□□□□ -0.79
CNOT9-202ENST00000295701 LRRC3Q9BY71 257 aa10.13□□□□□ -0.79
CNOT9-202ENST00000295701 EPC1Q9H2F5 836 aa10.13□□□□□ -0.79
CNOT9-202ENST00000295701 CHRDQ9H2X0 955 aa10.13□□□□□ -0.79
CNOT9-202ENST00000295701 ANKFY1Q9P2R3 1169 aa10.13□□□□□ -0.79
CNOT9-202ENST00000295701 AFF4Q9UHB7 1163 aaKnown RBP10.13□□□□□ -0.79
CNOT9-202ENST00000295701 DCDC2BA2VCK2 349 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 HEPACAM2A8MVW5 462 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 PPEF2O14830 753 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 SOAT2O75908 522 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 CXCL8P10145 99 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 CHRNB1P11230 501 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 CPB1P15086 417 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 CCNE1P24864 410 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 U2AF2P26368 475 aaKnown RBP eCLIP10.12□□□□□ -0.795e-7■■□□□ 12.1
CNOT9-202ENST00000295701 TNFSF9P41273 254 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 TRAPPC10P48553 1259 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 SATB1Q01826 763 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 DUSP4Q13115 394 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 NOLC1Q14978 699 aaKnown RBP eCLIP10.12□□□□□ -0.79
CNOT9-202ENST00000295701 LINC01559Q495D7 138 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 STXBP5Q5T5C0 1151 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 CYP4A22Q5TCH4 519 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 KRT79Q5XKE5 535 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 TPGS2Q68CL5 300 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 ZNF280DQ6N043 979 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 LYPD8Q6UX82 237 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 TMC8Q8IU68 726 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 MFSD6LQ8IWD5 586 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 TTC9BQ8N6N2 239 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 FAM184AQ8NB25 1140 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 TMEM161BQ8NDZ6 487 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 TTC8Q8TAM2 541 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 BAP1Q92560 729 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 DNASE1L2Q92874 299 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 SMARCD2Q92925 531 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 CNTNAP3BQ96NU0 1288 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 LRRC3BQ96PB8 259 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 TMEM209Q96SK2 561 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 NTPCRQ9BSD7 190 aaKnown RBP10.12□□□□□ -0.79
CNOT9-202ENST00000295701 CNTNAP3Q9BZ76 1288 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 DNAJC25Q9H1X3 360 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 RBM12Q9NTZ6 932 aaKnown RBP10.12□□□□□ -0.79
CNOT9-202ENST00000295701 C2orf42Q9NWW7 574 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 USP18Q9UMW8 372 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 NOL7Q9UMY1 257 aaKnown RBP10.12□□□□□ -0.79
CNOT9-202ENST00000295701 MRPS17Q9Y2R5 130 aaKnown RBP10.12□□□□□ -0.79
CNOT9-202ENST00000295701 RBM19Q9Y4C8 960 aaKnown RBP10.12□□□□□ -0.79
CNOT9-202ENST00000295701 PIAS3Q9Y6X2 628 aa10.12□□□□□ -0.79
CNOT9-202ENST00000295701 TCHHQ07283 1943 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 DENND4CQ5VZ89 1909 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 A0A1W2PRU2 124 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 LACTBL1A8MY62 500 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 ARNTLO00327 626 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 MAN2B1O00754 1011 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 ZNF263O14978 683 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 MICAL2O94851 1124 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 MAPTP10636 758 aaKnown RBP10.11□□□□□ -0.79
CNOT9-202ENST00000295701 PSMC3P17980 439 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 GUCY2CP25092 1073 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 MARCKSP29966 332 aaPredicted RBP10.11□□□□□ -0.79
CNOT9-202ENST00000295701 CTHP32929 405 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 EPHA5P54756 1037 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 SPEM2Q0P670 501 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 SRSF5Q13243 272 aaKnown RBP10.11□□□□□ -0.79
CNOT9-202ENST00000295701 ZBTB6Q15916 424 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 ARSHQ5FYA8 562 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 IQCEQ6IPM2 695 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 ELMOD1Q8N336 334 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 APPL2Q8NEU8 664 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 LRRC15Q8TF66 581 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 IRF7Q92985 503 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 ZFYVE19Q96K21 471 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 DRC1Q96MC2 740 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 KIF2CQ99661 725 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 ATP13A2Q9NQ11 1180 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 ASAH2Q9NR71 780 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 YIPF1Q9Y548 306 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 SPAG17Q6Q759 2223 aa10.11□□□□□ -0.79
CNOT9-202ENST00000295701 TTC26A0AVF1 554 aa10.1□□□□□ -0.79
CNOT9-202ENST00000295701 SLC38A8A6NNN8 435 aa10.1□□□□□ -0.79
CNOT9-202ENST00000295701 CHURC1-FNTBB4DL54 471 aa10.1□□□□□ -0.79
CNOT9-202ENST00000295701 M0QZQ0 153 aa10.1□□□□□ -0.79
CNOT9-202ENST00000295701 CLDN3O15551 220 aa10.1□□□□□ -0.79
CNOT9-202ENST00000295701 TOM1L1O75674 476 aa10.1□□□□□ -0.79
CNOT9-202ENST00000295701 KRT37O76014 449 aa10.1□□□□□ -0.79
CNOT9-202ENST00000295701 OAZ2O95190 189 aa10.1□□□□□ -0.79
CNOT9-202ENST00000295701 PLA2G4BP0C869 781 aa10.1□□□□□ -0.79
CNOT9-202ENST00000295701 PLS3P13797 630 aa10.1□□□□□ -0.79
CNOT9-202ENST00000295701 LRPAP1P30533 357 aa10.1□□□□□ -0.79
CNOT9-202ENST00000295701 MATR3P43243 847 aaKnown RBP eCLIP10.1□□□□□ -0.795e-14■□□□□ 9.9
CNOT9-202ENST00000295701 FNTBP49356 437 aa10.1□□□□□ -0.79
CNOT9-202ENST00000295701 SLC12A3P55017 1021 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms