RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 GHRP10912 638 aa18.56■□□□□ 0.56
CDC42EP3-201ENST00000295324 EPHB3P54753 998 aa18.56■□□□□ 0.56
CDC42EP3-201ENST00000295324 UGP2Q16851 508 aa18.56■□□□□ 0.56
CDC42EP3-201ENST00000295324 C1orf131Q8NDD1 294 aaKnown RBP18.56■□□□□ 0.56
CDC42EP3-201ENST00000295324 ENGASEQ8NFI3 743 aa18.56■□□□□ 0.56
CDC42EP3-201ENST00000295324 GBP5Q96PP8 586 aa18.56■□□□□ 0.56
CDC42EP3-201ENST00000295324 HDAC6Q9UBN7 1215 aa18.56■□□□□ 0.56
CDC42EP3-201ENST00000295324 APRTP07741 180 aa18.56■□□□□ 0.56
CDC42EP3-201ENST00000295324 TWF1Q12792 350 aa18.56■□□□□ 0.56
CDC42EP3-201ENST00000295324 CAPN7Q9Y6W3 813 aa18.56■□□□□ 0.56
CDC42EP3-201ENST00000295324 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.56■□□□□ 0.56
CDC42EP3-201ENST00000295324 SFSWAPQ12872 951 aaKnown RBP18.56■□□□□ 0.56
CDC42EP3-201ENST00000295324 ZNF177Q13360 481 aaPredicted RBP18.56■□□□□ 0.56
CDC42EP3-201ENST00000295324 BTG3Q14201 252 aaPredicted RBP18.56■□□□□ 0.56
CDC42EP3-201ENST00000295324 MUM1Q2TAK8 710 aa18.56■□□□□ 0.56
CDC42EP3-201ENST00000295324 SLC27A1Q6PCB7 646 aa18.56■□□□□ 0.56
CDC42EP3-201ENST00000295324 PPWD1Q96BP3 646 aaKnown RBP18.56■□□□□ 0.56
CDC42EP3-201ENST00000295324 OSBPL8Q9BZF1 889 aa18.56■□□□□ 0.56
CDC42EP3-201ENST00000295324 RAB6BQ9NRW1 208 aa18.56■□□□□ 0.56
CDC42EP3-201ENST00000295324 TBKBP1A7MCY6 615 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 AMHP03971 560 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 AKT1P31749 480 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 IL1RL1Q01638 556 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 MTF1Q14872 753 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 PTGISQ16647 500 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 EPM2AIP1Q7L775 607 aaPredicted RBP18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 TRPM4Q8TD43 1214 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 TRIM55Q9BYV6 548 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 WDCPQ9H6R7 721 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 GTF3C4Q9UKN8 822 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 FKTNO75072 461 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 BCAT1P54687 386 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 EPC2Q52LR7 807 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 FBXO47Q5MNV8 452 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 ACAD11Q709F0 780 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 SPIRE2Q8WWL2 714 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 SNX12Q9UMY4 172 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 CFAP99D6REC4 459 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 H0Y626 953 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 ATP1A1P05023 1023 aaKnown RBP18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 EPHB2P29323 1055 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 NUGGCQ68CJ6 796 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 FOPNLQ96NB1 174 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 TRPV2Q9Y5S1 764 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 GLTPD2A6NH11 291 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 SMIM24O75264 130 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 MBL2P11226 248 aaPredicted RBP18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 RALBP11234 206 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 CLCN6P51797 869 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 TRIM65Q6PJ69 517 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 CYFIP2Q96F07 1278 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 SYT17Q9BSW7 474 aa18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.55■□□□□ 0.56
CDC42EP3-201ENST00000295324 OTOP1Q7RTM1 612 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 TBC1D19Q8N5T2 526 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 M0QYT0 321 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 HIST1H2AGP0C0S8 130 aaPredicted RBP18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 HIST1H2ADP20671 130 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 HIST1H2AHQ96KK5 128 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 RPRD1AQ96P16 312 aaPredicted RBP18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 HIST1H2AJQ99878 128 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 H2AFJQ9BTM1 129 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 PAK5Q9P286 719 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 INTUQ9ULD6 942 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 CARNS1A5YM72 827 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 FAM86B1E9PN63 330 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 MYO1DO94832 1006 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 FBXO21O94952 628 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 FAM86B2P0C5J1 330 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 SYTL3Q4VX76 610 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 HP1BP3Q5SSJ5 553 aaPredicted RBP18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 ACAD10Q6JQN1 1059 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 SPATA4Q8NEY3 305 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 CYP2W1Q8TAV3 490 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 SERPINI1Q99574 410 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 PITPNM3Q9BZ71 974 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 AMACRQ9UHK6 382 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 ITGA11Q9UKX5 1188 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 TAL1P17542 331 aaPredicted RBP18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 CYP24A1Q07973 514 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 IFT88Q13099 833 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 SZRD1Q7Z422 152 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 GIPC2Q8TF65 315 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 ORC6Q9Y5N6 252 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 KCNA4P22459 653 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 TACO1Q9BSH4 297 aaKnown RBP18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 TRAIPQ9BWF2 469 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 ZNF518BQ9C0D4 1074 aa18.54■□□□□ 0.56
CDC42EP3-201ENST00000295324 FASTKD1Q53R41 847 aaKnown RBP18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 RABGAP1LQ5R372 815 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 C4orf22Q6V702 233 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 ITIH5Q86UX2 942 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 APOBEC2Q9Y235 224 aaKnown RBP18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 NDUFS3O75489 264 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 E2F5Q15329 346 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 RASGRP2Q7LDG7 609 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 SPATA18Q8TC71 538 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 CYTH2Q99418 400 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 ASB7Q9H672 318 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 TXLNGQ9NUQ3 528 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms