RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 MYL1P05976 194 aa16.48■□□□□ 0.23
PDE6D-201ENST00000287600 TARSP26639 723 aaKnown RBP16.48■□□□□ 0.23
PDE6D-201ENST00000287600 TWF1Q12792 350 aa16.48■□□□□ 0.23
PDE6D-201ENST00000287600 MRPL58Q14197 206 aaKnown RBP16.48■□□□□ 0.23
PDE6D-201ENST00000287600 GRM2Q14416 872 aa16.48■□□□□ 0.23
PDE6D-201ENST00000287600 CYP4A22Q5TCH4 519 aa16.48■□□□□ 0.23
PDE6D-201ENST00000287600 TANGO2Q6ICL3 276 aa16.48■□□□□ 0.23
PDE6D-201ENST00000287600 ZNF852Q6ZMS4 543 aa16.48■□□□□ 0.23
PDE6D-201ENST00000287600 EPM2AIP1Q7L775 607 aaPredicted RBP16.48■□□□□ 0.23
PDE6D-201ENST00000287600 ERMP1Q7Z2K6 904 aa16.48■□□□□ 0.23
PDE6D-201ENST00000287600 KIAA2013Q8IYS2 634 aa16.48■□□□□ 0.23
PDE6D-201ENST00000287600 MAML2Q8IZL2 1156 aaPredicted RBP16.48■□□□□ 0.23
PDE6D-201ENST00000287600 ZNF507Q8TCN5 953 aa16.48■□□□□ 0.23
PDE6D-201ENST00000287600 DNASE1L2Q92874 299 aa16.48■□□□□ 0.23
PDE6D-201ENST00000287600 ZFP14Q9HCL3 533 aa16.48■□□□□ 0.23
PDE6D-201ENST00000287600 EXOC1Q9NV70 894 aa16.48■□□□□ 0.23
PDE6D-201ENST00000287600 AFF4Q9UHB7 1163 aaKnown RBP16.48■□□□□ 0.23
PDE6D-201ENST00000287600 PCDHB8Q9UN66 801 aa16.48■□□□□ 0.23
PDE6D-201ENST00000287600 CACNA1IQ9P0X4 2223 aa16.47■□□□□ 0.23
PDE6D-201ENST00000287600 GVINP1Q7Z2Y8 2422 aa16.47■□□□□ 0.23
PDE6D-201ENST00000287600 TULP1O00294 542 aaPredicted RBP16.47■□□□□ 0.23
PDE6D-201ENST00000287600 EIF3DO15371 548 aaKnown RBP eCLIP16.47■□□□□ 0.23
PDE6D-201ENST00000287600 NCAM2O15394 837 aa16.47■□□□□ 0.23
PDE6D-201ENST00000287600 KLRC4O43908 158 aa16.47■□□□□ 0.23
PDE6D-201ENST00000287600 FCARP24071 287 aa16.47■□□□□ 0.23
PDE6D-201ENST00000287600 HOXD13P35453 343 aa16.47■□□□□ 0.23
PDE6D-201ENST00000287600 YWHAHQ04917 246 aaPredicted RBP16.47■□□□□ 0.23
PDE6D-201ENST00000287600 CSTF1Q05048 431 aaKnown RBP16.47■□□□□ 0.23
PDE6D-201ENST00000287600 KMT5BQ4FZB7 885 aa16.47■□□□□ 0.23
PDE6D-201ENST00000287600 FAM78AQ5JUQ0 283 aa16.47■□□□□ 0.23
PDE6D-201ENST00000287600 ZNF512Q96ME7 567 aaPredicted RBP16.47■□□□□ 0.23
PDE6D-201ENST00000287600 PCIF1Q9H4Z3 704 aa16.47■□□□□ 0.23
PDE6D-201ENST00000287600 BRD9Q9H8M2 597 aa16.47■□□□□ 0.23
PDE6D-201ENST00000287600 ASAH2Q9NR71 780 aa16.47■□□□□ 0.23
PDE6D-201ENST00000287600 FBXO4Q9UKT5 387 aa16.47■□□□□ 0.23
PDE6D-201ENST00000287600 MRPS17Q9Y2R5 130 aaKnown RBP16.47■□□□□ 0.23
PDE6D-201ENST00000287600 TICRRQ7Z2Z1 1910 aa16.47■□□□□ 0.23
PDE6D-201ENST00000287600 COL4A2P08572 1712 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 MICAL2O94851 1124 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 RPN1P04843 607 aaKnown RBP16.46■□□□□ 0.23
PDE6D-201ENST00000287600 ADRB2P07550 413 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 MYL4P12829 197 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 GARTP22102 1010 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 CCR2P41597 374 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 ZNF528Q3MIS6 628 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 ARMCX5Q6P1M9 558 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 RNF19BQ6ZMZ0 732 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 CD302Q8IX05 232 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 NELFCDQ8IXH7 590 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 FMR1NBQ8N0W7 255 aaPredicted RBP16.46■□□□□ 0.23
PDE6D-201ENST00000287600 TMEM130Q8N3G9 435 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 NOC3LQ8WTT2 800 aaKnown RBP16.46■□□□□ 0.23
PDE6D-201ENST00000287600 SCFD1Q8WVM8 642 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 RUBCNQ92622 972 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 SAAL1Q96ER3 474 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 CCDC34Q96HJ3 373 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 ASB16Q96NS5 453 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 NELL2Q99435 816 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 CBWD1Q9BRT8 395 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 FAM213AQ9BRX8 229 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 UBQLN1Q9UMX0 589 aaKnown RBP16.46■□□□□ 0.23
PDE6D-201ENST00000287600 YIPF1Q9Y548 306 aa16.46■□□□□ 0.23
PDE6D-201ENST00000287600 SPTBN4Q9H254 2564 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 GOLGA8IPA6NC78 632 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 GOLGA8JA6NMD2 632 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 SPTLC1O15269 473 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 LDHAP00338 332 aaKnown RBP16.45■□□□□ 0.22
PDE6D-201ENST00000287600 LRPAP1P30533 357 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 DPYDQ12882 1025 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 STK4Q13043 487 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 PSMD2Q13200 908 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 ZBTB6Q15916 424 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 JADE1Q6IE81 842 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 CRELD2Q6UXH1 353 aaPredicted RBP16.45■□□□□ 0.22
PDE6D-201ENST00000287600 USP37Q86T82 979 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 HS6ST3Q8IZP7 471 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 LEMD2Q8NC56 503 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 ZSWIM2Q8NEG5 633 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 ENGASEQ8NFI3 743 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 CCDC47Q96A33 483 aaKnown RBP16.45■□□□□ 0.22
PDE6D-201ENST00000287600 PGLYRP2Q96PD5 576 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 TRMT61BQ9BVS5 477 aaKnown RBP16.45■□□□□ 0.22
PDE6D-201ENST00000287600 SLITRK6Q9H5Y7 841 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 CEP72Q9P209 647 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 MAFFQ9ULX9 164 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 PCDHGA2Q9Y5H1 932 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 TIMM13Q9Y5L4 95 aaPredicted RBP16.45■□□□□ 0.22
PDE6D-201ENST00000287600 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.45■□□□□ 0.22
PDE6D-201ENST00000287600 UBE4BO95155 1302 aa16.45■□□□□ 0.22
PDE6D-201ENST00000287600 M0QZQ0 153 aa16.44■□□□□ 0.22
PDE6D-201ENST00000287600 NRG2O14511 850 aaPredicted RBP16.44■□□□□ 0.22
PDE6D-201ENST00000287600 TGFB1I1O43294 461 aa16.44■□□□□ 0.22
PDE6D-201ENST00000287600 XPOTO43592 962 aaKnown RBP16.44■□□□□ 0.22
PDE6D-201ENST00000287600 EXTL3O43909 919 aa16.44■□□□□ 0.22
PDE6D-201ENST00000287600 OR4Q2P0C623 313 aa16.44■□□□□ 0.22
PDE6D-201ENST00000287600 GJA1P17302 382 aa16.44■□□□□ 0.22
PDE6D-201ENST00000287600 CYP3A5P20815 502 aa16.44■□□□□ 0.22
PDE6D-201ENST00000287600 RPS9P46781 194 aaKnown RBP16.44■□□□□ 0.22
PDE6D-201ENST00000287600 FAM160A1Q05DH4 1040 aa16.44■□□□□ 0.22
PDE6D-201ENST00000287600 DSTYKQ6XUX3 929 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms