RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 AGBL2Q5U5Z8 902 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 SDE2Q6IQ49 451 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 NSL1Q96IY1 281 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 WWOXQ9NZC7 414 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 KANSL1LA0AUZ9 987 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 SLC16A4O15374 487 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 YWHAQP27348 245 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 MDH1P40925 334 aaKnown RBP9.1□□□□□ -0.95
NIPBL-201ENST00000282516 MFSD4BQ5TF39 518 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 MFSD14CQ5VZR4 134 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 GPD1LQ8N335 351 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 BCL2L14Q9BZR8 327 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 SOAT2O75908 522 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 ASNSP08243 561 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 ZNF23P17027 643 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 RIBC1Q8N443 379 aaPredicted RBP9.1□□□□□ -0.95
NIPBL-201ENST00000282516 CCT8L2Q96SF2 557 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 PACSIN1Q9BY11 444 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 DLGAP2Q9P1A6 1054 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 WDR35Q9P2L0 1181 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 XPO7Q9UIA9 1087 aaKnown RBP9.1□□□□□ -0.95
NIPBL-201ENST00000282516 STK36Q9NRP7 1315 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 VCLP18206 1134 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 STAT5AP42229 794 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 STAT5BP51692 787 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 HEATR4Q86WZ0 1026 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 MOV10L1Q9BXT6 1211 aaKnown RBP9.1□□□□□ -0.95
NIPBL-201ENST00000282516 RBAKQ9NYW8 714 aaPredicted RBP9.1□□□□□ -0.95
NIPBL-201ENST00000282516 SLC30A1Q9Y6M5 507 aa9.1□□□□□ -0.95
NIPBL-201ENST00000282516 PIK3CDO00329 1044 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 PSTPIP1O43586 416 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 ATP9BO43861 1147 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 ATP1A1P05023 1023 aaKnown RBP9.09□□□□□ -0.95
NIPBL-201ENST00000282516 GPR1P46091 355 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 UBE2SQ16763 222 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 VN1R5Q7Z5H4 357 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 ANKMY2Q8IV38 441 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 KIF12Q96FN5 646 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 CATSPERBQ9H7T0 1116 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 KLHL11Q9NVR0 708 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 CHRNB3Q05901 458 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 NFX1Q12986 1120 aaKnown RBP9.09□□□□□ -0.95
NIPBL-201ENST00000282516 ZNF746Q6NUN9 644 aaPredicted RBP9.09□□□□□ -0.95
NIPBL-201ENST00000282516 NSUN6Q8TEA1 469 aaKnown RBP9.09□□□□□ -0.95
NIPBL-201ENST00000282516 USP13Q92995 863 aaPredicted RBP9.09□□□□□ -0.95
NIPBL-201ENST00000282516 PHACTR1Q9C0D0 580 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 FAM153AQ9UHL3 310 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 VAV3Q9UKW4 847 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 IGF2BP3O00425 579 aaKnown RBP eCLIP9.09□□□□□ -0.95
NIPBL-201ENST00000282516 CNOT3O75175 753 aaKnown RBP9.09□□□□□ -0.95
NIPBL-201ENST00000282516 POTEIP0CG38 1075 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 PUDPQ08623 228 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 STX5Q13190 355 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 KLHL17Q6TDP4 642 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 PID1Q7Z2X4 250 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 MCRS1Q96EZ8 462 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 HMG20AQ9NP66 347 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 IPPQ9Y573 584 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 A8MXQ7 604 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 PPP1R37O75864 691 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 ATP1A3P13637 1013 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 SFSWAPQ12872 951 aaKnown RBP9.09□□□□□ -0.95
NIPBL-201ENST00000282516 PDZK1Q5T2W1 519 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 CXorf56Q9H5V9 222 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 PDE9AO76083 593 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 NFICP08651 508 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 GSTM1P09488 218 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 HPGDP15428 266 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 C11orf96Q7Z7L8 435 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 C1orf131Q8NDD1 294 aaKnown RBP9.09□□□□□ -0.95
NIPBL-201ENST00000282516 LGR6Q9HBX8 967 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 NCK2O43639 380 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 BMP10O95393 424 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 TCN1P20061 433 aaPredicted RBP9.09□□□□□ -0.95
NIPBL-201ENST00000282516 GTF2E2P29084 291 aaKnown RBP9.09□□□□□ -0.95
NIPBL-201ENST00000282516 RXRGP48443 463 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 KYNUQ16719 465 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 FAM83EQ2M2I3 478 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 NT5DC4Q86YG4 428 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 HS6ST3Q8IZP7 471 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 PGBD3Q8N328 593 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 SNRNP27Q8WVK2 155 aaKnown RBP9.09□□□□□ -0.95
NIPBL-201ENST00000282516 COPS7BQ9H9Q2 264 aaPredicted RBP9.09□□□□□ -0.95
NIPBL-201ENST00000282516 FAM217BQ9NTX9 383 aaPredicted RBP9.09□□□□□ -0.95
NIPBL-201ENST00000282516 PTCH1Q13635 1447 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 ZNF862O60290 1169 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 BBOX1O75936 387 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 TMEM132DQ14C87 1099 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 FRMD5Q7Z6J6 570 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 FRMD8Q9BZ67 464 aaPredicted RBP9.09□□□□□ -0.95
NIPBL-201ENST00000282516 NCKAP5LQ9HCH0 1330 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 MYH9P35579 1960 aaKnown RBP9.09□□□□□ -0.95
NIPBL-201ENST00000282516 LOC102724159A0A0B4J2E5 919 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 MAGEA13PA6NCF6 341 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 PPP2R1BP30154 601 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 AP1S2P56377 157 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 PIGHQ14442 188 aaPredicted RBP9.09□□□□□ -0.95
NIPBL-201ENST00000282516 PWP2Q15269 919 aaKnown RBP9.09□□□□□ -0.95
NIPBL-201ENST00000282516 SLC7A14Q8TBB6 771 aa9.09□□□□□ -0.95
NIPBL-201ENST00000282516 SLC10A4Q96EP9 437 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms