RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 MAMLD1Q13495 774 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 SGSM1Q2NKQ1 1148 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 TMEM63BQ5T3F8 832 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 RBM41Q96IZ5 413 aaKnown RBP12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 LBHD1Q9BQE6 289 aaPredicted RBP12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 TRAIPQ9BWF2 469 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 FHDC1Q9C0D6 1143 aaPredicted RBP12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 ARHGAP28Q9P2N2 729 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 PDGFRBP09619 1106 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 RARGP13631 454 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 ITIH2P19823 946 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 ECHS1P30084 290 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 MAN1A1P33908 653 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 GCLCP48506 637 aaPredicted RBP12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 PEX5P50542 639 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 CDH6P55285 790 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 IRX4P78413 519 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 TTLL4Q14679 1199 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 DPY19L2Q6NUT2 758 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 KIF12Q96FN5 646 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 FAM167AQ96KS9 214 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 SNX9Q9Y5X1 595 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 MAGEA4P43358 317 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 EFNA5P52803 228 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 CFAP36Q96G28 342 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 SEPT10Q9P0V9 454 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 VNN1O95497 513 aa12.52□□□□□ -0.4
SLC13A3-201ENST00000279027 ATP4AP20648 1035 aa12.52□□□□□ -0.4
SLC13A3-201ENST00000279027 FNTAP49354 379 aa12.52□□□□□ -0.4
SLC13A3-201ENST00000279027 YWHAEP62258 255 aaKnown RBP12.52□□□□□ -0.4
SLC13A3-201ENST00000279027 IFRD2Q12894 506 aaPredicted RBP12.52□□□□□ -0.4
SLC13A3-201ENST00000279027 IER5Q5VY09 327 aa12.52□□□□□ -0.4
SLC13A3-201ENST00000279027 CATSPER4Q7RTX7 472 aa12.52□□□□□ -0.4
SLC13A3-201ENST00000279027 CROCCP2Q86T23 111 aa12.52□□□□□ -0.4
SLC13A3-201ENST00000279027 JPH2Q9BR39 696 aaPredicted RBP12.52□□□□□ -0.4
SLC13A3-201ENST00000279027 TJP2Q9UDY2 1190 aa12.52□□□□□ -0.4
SLC13A3-201ENST00000279027 MROH7Q68CQ1 1323 aa12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 PPFIA2O75334 1257 aa12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 C4BPAP04003 597 aaKnown RBP12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 ADORA2BP29275 332 aa12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 NOMO3P69849 1222 aa12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 CHADLQ6NUI6 762 aa12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 METTL7BQ6UX53 244 aa12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 ZDHHC24Q6UX98 284 aa12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 TRIM72Q6ZMU5 477 aa12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 SMC6Q96SB8 1091 aa12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 MCF2LO15068 1137 aa12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 FARP2O94887 1054 aaPredicted RBP12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 PTGIRP43119 386 aa12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 KIZQ2M2Z5 673 aa12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 DENND1BQ6P3S1 775 aa12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 PAXIP1Q6ZW49 1069 aaPredicted RBP12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 TMEM192Q8IY95 271 aa12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 FAM71DQ8N9W8 422 aa12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 TGS1Q96RS0 853 aaKnown RBP12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 KLHL14Q9P2G3 628 aa12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 HESX1Q9UBX0 185 aa12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 TTLL3Q9Y4R7 772 aa12.52□□□□□ -0.41
SLC13A3-201ENST00000279027 TAF1LQ8IZX4 1826 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 SOWAHBA6NEL2 793 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 USP2O75604 605 aaPredicted RBP12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 AGTP01019 485 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 P4HA1P13674 534 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 INSRRP14616 1297 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 RFC5P40937 340 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 ZNF280AP59817 542 aaPredicted RBP12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 ZNF449Q6P9G9 518 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 KIF2BQ8N4N8 673 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 PPP1R14CQ8TAE6 165 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 STRA6Q9BX79 667 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 GRHL1Q9NZI5 618 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 KLK14Q9P0G3 267 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 PRPSAP2O60256 369 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 RFC1P35251 1148 aaPredicted RBP12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 MXD4Q14582 209 aaPredicted RBP12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 TXNRD3NBQ6F5E7 133 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 CD302Q8IX05 232 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 BBOF1Q8ND07 529 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 AFG1LQ8WV93 481 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 CFAP57Q96MR6 1250 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 ARIH2O95376 493 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 PDGFRAP16234 1089 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 PHKA2P46019 1235 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 HERPUD2Q9BSE4 406 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 PITPNM3Q9BZ71 974 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 SMYD3Q9H7B4 428 aa12.51□□□□□ -0.41
SLC13A3-201ENST00000279027 MED7O43513 233 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 SUN1O94901 812 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 NFICP08651 508 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 STAG3L1P0CL83 205 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 OTUD4Q01804 1114 aaKnown RBP12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 LMNB2Q03252 620 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 PLCB4Q15147 1175 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 CENPUQ71F23 418 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 ACTL9Q8TC94 416 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 PCYOX1Q9UHG3 505 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 DCTN4Q9UJW0 460 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 HES2Q9Y543 173 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 CDK5RAP2Q96SN8 1893 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 A0A0B4J269 797 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms