RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 EPHA10Q5JZY3 1008 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 TTC38Q5R3I4 469 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 KAZNQ674X7 775 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 UNC5DQ6UXZ4 953 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 LIAT1Q6ZQX7 453 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 ANKS1BQ7Z6G8 1248 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 CNGA4Q8IV77 575 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 TEX11Q8IYF3 940 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 FANCBQ8NB91 859 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 ERMNQ8TAM6 284 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 IPCEF1Q8WWN9 437 aaPredicted RBP3.13□□□□□ -1.91
HERC4-201ENST00000277817 LRTOMTQ8WZ04 291 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 EEF2KMTQ96G04 330 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 CEP95Q96GE4 821 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 UNKQ9C0B0 810 aaKnown RBP3.13□□□□□ -1.91
HERC4-201ENST00000277817 PRO3102Q9H379 93 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 GP6Q9HCN6 339 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 BRD7Q9NPI1 651 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 ABCF3Q9NUQ8 709 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 DCAF16Q9NXF7 216 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 RSPH14Q9UHP6 348 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 FLT1P17948 1338 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 A0A087WZ62 844 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 FAM234BA2RU67 622 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 A6NLC8 198 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 EIF3FO00303 357 aaPredicted RBP3.13□□□□□ -1.91
HERC4-201ENST00000277817 SOX1O00570 391 aaPredicted RBP3.13□□□□□ -1.91
HERC4-201ENST00000277817 AQP7O14520 342 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 COBLO75128 1261 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 BBOX1O75936 387 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 ENDOD1O94919 500 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 PDE8BO95263 885 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 PARP1P09874 1014 aaKnown RBP3.13□□□□□ -1.91
HERC4-201ENST00000277817 NAT2P11245 290 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 MUTP22033 750 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 CMA1P23946 247 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 ELF1P32519 619 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 CTSWP56202 376 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 INHBEP58166 350 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 RNASE9P60153 205 aaKnown RBP3.13□□□□□ -1.91
HERC4-201ENST00000277817 PLS1Q14651 629 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 PDCD2Q16342 344 aaPredicted RBP3.13□□□□□ -1.91
HERC4-201ENST00000277817 CCNG2Q16589 344 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 C5orf22Q49AR2 442 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 KRTCAP3Q53RY4 240 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 TRAPPC3LQ5T215 181 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 LRRC8AQ8IWT6 810 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 ESX1Q8N693 406 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 LRRN4CLQ8ND94 238 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 SMARCC2Q8TAQ2 1214 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 IFT81Q8WYA0 676 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 SLC30A3Q99726 388 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 FDXACB1Q9BRP7 624 aaPredicted RBP3.13□□□□□ -1.91
HERC4-201ENST00000277817 TAB2Q9NYJ8 693 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 VPS18Q9P253 973 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 IMPACTQ9P2X3 320 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 ZDHHC9Q9Y397 364 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 TRAF6Q9Y4K3 522 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 MROH5Q6ZUA9 1318 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 IGKV5-2P06315 115 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 RPS2P15880 293 aaKnown RBP3.13□□□□□ -1.91
HERC4-201ENST00000277817 ATF7P17544 494 aaPredicted RBP3.13□□□□□ -1.91
HERC4-201ENST00000277817 HTR1BP28222 390 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 KRT9P35527 623 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 PLCD1P51178 756 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 PPARAQ07869 468 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 ERCC6LQ2NKX8 1250 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 FAM209BQ5JX69 171 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 FBXW10Q5XX13 1052 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 DYMQ7RTS9 669 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 MAPKAPK5Q8IW41 473 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 CSGALNACT2Q8N6G5 542 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 NSUN7Q8NE18 718 aaKnown RBP3.13□□□□□ -1.91
HERC4-201ENST00000277817 TGFBRAP1Q8WUH2 860 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 ZFPM2Q8WW38 1151 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 NANOS1Q8WY41 292 aaKnown RBP3.13□□□□□ -1.91
HERC4-201ENST00000277817 SDCCAG3Q96C92 435 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 LPIN3Q9BQK8 851 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 GJB4Q9NTQ9 266 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 PCDHGB6Q9Y5F9 930 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 PCDHA9Q9Y5H5 950 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 COL4A4P53420 1690 aaPredicted RBP3.13□□□□□ -1.91
HERC4-201ENST00000277817 MYH13Q9UKX3 1938 aa3.13□□□□□ -1.91
HERC4-201ENST00000277817 SPDYE3A6NKU9 549 aa3.12□□□□□ -1.91
HERC4-201ENST00000277817 HSF2BPO75031 334 aa3.12□□□□□ -1.91
HERC4-201ENST00000277817 UFL1O94874 794 aa3.12□□□□□ -1.91
HERC4-201ENST00000277817 APBB3O95704 486 aa3.12□□□□□ -1.91
HERC4-201ENST00000277817 PCCAP05165 728 aaPredicted RBP3.12□□□□□ -1.91
HERC4-201ENST00000277817 ENPP1P22413 925 aa3.12□□□□□ -1.91
HERC4-201ENST00000277817 GABRB3P28472 473 aa3.12□□□□□ -1.91
HERC4-201ENST00000277817 RPS8P62241 208 aaKnown RBP3.12□□□□□ -1.91
HERC4-201ENST00000277817 ERVK-24P63145 666 aa3.12□□□□□ -1.91
HERC4-201ENST00000277817 MAP2K1Q02750 393 aaPredicted RBP3.12□□□□□ -1.91
HERC4-201ENST00000277817 CKAP4Q07065 602 aaKnown RBP3.12□□□□□ -1.91
HERC4-201ENST00000277817 DDR1Q08345 913 aa3.12□□□□□ -1.91
HERC4-201ENST00000277817 DAG1Q14118 895 aa3.12□□□□□ -1.91
HERC4-201ENST00000277817 PFKFB4Q16877 469 aa3.12□□□□□ -1.91
HERC4-201ENST00000277817 KIAA0753Q2KHM9 967 aa3.12□□□□□ -1.91
HERC4-201ENST00000277817 ANGEL2Q5VTE6 544 aaKnown RBP3.12□□□□□ -1.91
HERC4-201ENST00000277817 SPECC1LQ69YQ0 1117 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms