RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 TMEM176AQ96HP8 235 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 PLVAPQ9BX97 442 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 EIF2AQ9BY44 585 aaKnown RBP10.18□□□□□ -0.78
TRIM55-201ENST00000276573 SMYD3Q9H7B4 428 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 MED4Q9NPJ6 270 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.18□□□□□ -0.78
TRIM55-201ENST00000276573 DERAQ9Y315 318 aa10.18□□□□□ -0.78
TRIM55-201ENST00000276573 UTP11Q9Y3A2 253 aaKnown RBP10.18□□□□□ -0.78
TRIM55-201ENST00000276573 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.18□□□□□ -0.78
TRIM55-201ENST00000276573 TCRBV7S2A1N4TA0A589 114 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 C17orf102A2RUQ5 167 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 DAPK3O43293 454 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 CA12O43570 354 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 DUSP11O75319 330 aaKnown RBP10.17□□□□□ -0.78
TRIM55-201ENST00000276573 CILPO75339 1184 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 GJB6O95452 261 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 RARAP10276 462 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 AKR1A1P14550 325 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 MAN1A1P33908 653 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 TAS2R40P59535 323 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 PURAQ00577 322 aaKnown RBP10.17□□□□□ -0.78
TRIM55-201ENST00000276573 DR1Q01658 176 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 PTPN11Q06124 597 aaPredicted RBP10.17□□□□□ -0.78
TRIM55-201ENST00000276573 SIX1Q15475 284 aaPredicted RBP10.17□□□□□ -0.78
TRIM55-201ENST00000276573 TERF2Q15554 542 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 CYP1B1Q16678 543 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 HSP90B2PQ58FF3 399 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 MREGQ8N565 214 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 TRPV1Q8NER1 839 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.17□□□□□ -0.78
TRIM55-201ENST00000276573 FAM71BQ8TC56 605 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 DDX27Q96GQ7 796 aaKnown RBP10.17□□□□□ -0.78
TRIM55-201ENST00000276573 TWNKQ96RR1 684 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 KATNAL1Q9BW62 490 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 ELOVL4Q9GZR5 314 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 CXCL16Q9H2A7 254 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 FAM124BQ9H5Z6 455 aaPredicted RBP10.17□□□□□ -0.78
TRIM55-201ENST00000276573 FAM114A2Q9NRY5 505 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 PCYOX1Q9UHG3 505 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 IP6K2Q9UHH9 426 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 MTUS1Q9ULD2 1270 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 CEP83Q9Y592 693 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 KPNA6O60684 536 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 VDRP11473 427 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 GNAT1P11488 350 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 ECHS1P30084 290 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 HOXC8P31273 242 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 GGCXP38435 758 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 CRYBB1P53674 252 aaPredicted RBP10.17□□□□□ -0.78
TRIM55-201ENST00000276573 RPL7AP62424 266 aaKnown RBP10.17□□□□□ -0.78
TRIM55-201ENST00000276573 TAP1Q03518 808 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 HLTFQ14527 1009 aaKnown RBP eCLIP10.17□□□□□ -0.78
TRIM55-201ENST00000276573 SNX17Q15036 470 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 PPP1R15BQ5SWA1 713 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 DUPD1Q68J44 220 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 ALKAL1Q6UXT8 129 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 RHOT1Q8IXI2 618 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 TTC39CQ8N584 583 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 SNX27Q96L92 541 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 ZMAT2Q96NC0 199 aaKnown RBP10.17□□□□□ -0.78
TRIM55-201ENST00000276573 ZIC5Q96T25 663 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 ERP44Q9BS26 406 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 RAB17Q9H0T7 212 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 LCMT1Q9UIC8 334 aa10.17□□□□□ -0.78
TRIM55-201ENST00000276573 BARX2Q9UMQ3 279 aaPredicted RBP10.17□□□□□ -0.78
TRIM55-201ENST00000276573 GOLGA6BA6NDN3 693 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 PSTPIP1O43586 416 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 COILP38432 576 aaPredicted RBP10.16□□□□□ -0.78
TRIM55-201ENST00000276573 YARSP54577 528 aaKnown RBP10.16□□□□□ -0.78
TRIM55-201ENST00000276573 DRG2P55039 364 aaKnown RBP10.16□□□□□ -0.78
TRIM55-201ENST00000276573 FAM193AP78312 1265 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 INCA1Q0VD86 236 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 MYO1EQ12965 1108 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 ORC1Q13415 861 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 CNGA2Q16280 664 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 DNAJC24Q6P3W2 148 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 TTC27Q6P3X3 843 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 IQCKQ8N0W5 287 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 C7orf31Q8N865 590 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 TMEM40Q8WWA1 233 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 MAIP1Q8WWC4 291 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 HEXIM2Q96MH2 286 aaKnown RBP10.16□□□□□ -0.78
TRIM55-201ENST00000276573 TRIM51Q9BSJ1 452 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 NEUROG2Q9H2A3 272 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 LRRC19Q9H756 370 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 HMGXB4Q9UGU5 601 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 CYTH4Q9UIA0 394 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 KIAA1257Q9ULG3 409 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 USTQ9Y2C2 406 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 HES2Q9Y543 173 aa10.16□□□□□ -0.78
TRIM55-201ENST00000276573 MICAL2O94851 1124 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 HSPA9P38646 679 aaKnown RBP10.15□□□□□ -0.78
TRIM55-201ENST00000276573 PSMC4P43686 418 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 GJA9P57773 515 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 CYP4A22Q5TCH4 519 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 DAB2IPQ5VWQ8 1189 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 DCUN1D2Q6PH85 259 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 CCDC137Q6PK04 289 aaKnown RBP10.15□□□□□ -0.78
TRIM55-201ENST00000276573 JAMLQ86YT9 394 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 KATNAL2Q8IYT4 538 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms