RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 DDX50Q9BQ39 737 aaKnown RBP11.99□□□□□ -0.49
USP53-201ENST00000274030 HACL1Q9UJ83 578 aa11.99□□□□□ -0.49
USP53-201ENST00000274030 PITPNM2Q9BZ72 1349 aa11.99□□□□□ -0.49
USP53-201ENST00000274030 IGSF9BQ9UPX0 1349 aa11.99□□□□□ -0.49
USP53-201ENST00000274030 PYGLP06737 847 aa11.99□□□□□ -0.49
USP53-201ENST00000274030 MDM1Q8TC05 714 aa11.99□□□□□ -0.49
USP53-201ENST00000274030 SH3TC2Q8TF17 1288 aa11.99□□□□□ -0.49
USP53-201ENST00000274030 INPP5DQ92835 1189 aa11.99□□□□□ -0.49
USP53-201ENST00000274030 TMEM161AQ9NX61 479 aa11.99□□□□□ -0.49
USP53-201ENST00000274030 KCND2Q9NZV8 630 aa11.99□□□□□ -0.49
USP53-201ENST00000274030 ARHGAP26Q9UNA1 814 aa11.99□□□□□ -0.49
USP53-201ENST00000274030 CFAP73A6NFT4 308 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 MYO1GB0I1T2 1018 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 RFC5P40937 340 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 HUNKP57058 714 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 SLC29A2Q14542 456 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 LVRNQ6Q4G3 990 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 CHSY1Q86X52 802 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 FEZF2Q8TBJ5 459 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 ZNF669Q96BR6 464 aaPredicted RBP11.98□□□□□ -0.49
USP53-201ENST00000274030 PARK7Q99497 189 aaKnown RBP11.98□□□□□ -0.49
USP53-201ENST00000274030 KATNAL1Q9BW62 490 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 RANBP17Q9H2T7 1088 aaKnown RBP11.98□□□□□ -0.49
USP53-201ENST00000274030 PMPCBO75439 489 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 TMEM253P0C7T8 217 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 MYL2P10916 166 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 YY1P25490 414 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 UBE3AQ05086 875 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 NFIAQ12857 509 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 CNGA3Q16281 694 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 KCNT1Q5JUK3 1230 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 C10orf120Q5SQS8 335 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 PTRHD1Q6GMV3 140 aaKnown RBP11.98□□□□□ -0.49
USP53-201ENST00000274030 GPRC5AQ8NFJ5 357 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 OR9Q1Q8NGQ5 310 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 SCFD2Q8WU76 684 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 AGPAT3Q9NRZ7 376 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 SLC39A10Q9ULF5 831 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 USP15Q9Y4E8 981 aaPredicted RBP11.98□□□□□ -0.49
USP53-201ENST00000274030 DUSP10Q9Y6W6 482 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 KDM6AO15550 1401 aaPredicted RBP11.98□□□□□ -0.49
USP53-201ENST00000274030 GPR75-ASB3A0A0A6YYF3 556 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 ARHGAP10A1A4S6 786 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 KCNA4P22459 653 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.98□□□□□ -0.49
USP53-201ENST00000274030 ATG4AQ8WYN0 398 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 ZNF512BQ96KM6 892 aaPredicted RBP11.98□□□□□ -0.49
USP53-201ENST00000274030 TBX20Q9UMR3 447 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 TET3O43151 1660 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.98□□□□□ -0.49
USP53-201ENST00000274030 CHRM3P20309 590 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 EPHB2P29323 1055 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 FXR2P51116 673 aaKnown RBP eCLIP11.98□□□□□ -0.49
USP53-201ENST00000274030 TROAPQ12815 778 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 GALNT4Q8N4A0 578 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 USP38Q8NB14 1042 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 XPO6Q96QU8 1125 aaKnown RBP11.98□□□□□ -0.49
USP53-201ENST00000274030 TRIM45Q9H8W5 580 aaPredicted RBP11.98□□□□□ -0.49
USP53-201ENST00000274030 GPBP1L1Q9HC44 474 aaPredicted RBP11.98□□□□□ -0.49
USP53-201ENST00000274030 PRMT7Q9NVM4 692 aaPredicted RBP11.98□□□□□ -0.49
USP53-201ENST00000274030 ADCY10Q96PN6 1610 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 SV2CQ496J9 727 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 ZRANB3Q5FWF4 1079 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 PKN3Q6P5Z2 889 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 BARGINQ6ZT62 677 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 CBWD2Q8IUF1 395 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 B4GALNT2Q8NHY0 566 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 ERP44Q9BS26 406 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 PAK5Q9P286 719 aa11.98□□□□□ -0.49
USP53-201ENST00000274030 FOXN3O00409 490 aaPredicted RBP11.97□□□□□ -0.49
USP53-201ENST00000274030 ZBTB39O15060 712 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 HBP1O60381 514 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 MED24O75448 989 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 IL18RAPO95256 599 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 SGPL1O95470 568 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 ARHGEF7Q14155 803 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 KRT72Q14CN4 511 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 TKFCQ3LXA3 575 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 PAN2Q504Q3 1202 aaKnown RBP11.97□□□□□ -0.49
USP53-201ENST00000274030 POP1Q99575 1024 aaKnown RBP11.97□□□□□ -0.49
USP53-201ENST00000274030 MRPL1Q9BYD6 325 aaKnown RBP11.97□□□□□ -0.49
USP53-201ENST00000274030 RSAD1Q9HA92 442 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.97□□□□□ -0.49
USP53-201ENST00000274030 FKBP9O95302 570 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 POLBP06746 335 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 GTF2H3Q13889 308 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 PDIA6Q15084 440 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 DGKDQ16760 1214 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 TJAP1Q5JTD0 557 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 FKBP9P1Q75LS8 142 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 TRAPPC11Q7Z392 1133 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 PRMT6Q96LA8 375 aaPredicted RBP11.97□□□□□ -0.49
USP53-201ENST00000274030 GPR63Q9BZJ6 419 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 USP31Q70CQ4 1352 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 A0A087X0T9 212 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 EIF3DO15371 548 aaKnown RBP eCLIP11.97□□□□□ -0.49
USP53-201ENST00000274030 PGK2P07205 417 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 FAM228BP0C875 321 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 PCSK1P29120 753 aa11.97□□□□□ -0.49
USP53-201ENST00000274030 CLCN3P51790 818 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms