RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 TRPV5Q9NQA5 729 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 RBM12Q9NTZ6 932 aaKnown RBP9.74□□□□□ -0.85
TPM3-201ENST00000271850 ZSCAN32Q9NX65 697 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 DAXXQ9UER7 740 aaPredicted RBP9.74□□□□□ -0.85
TPM3-201ENST00000271850 CPSF3Q9UKF6 684 aaKnown RBP9.74□□□□□ -0.85
TPM3-201ENST00000271850 NDRG2Q9UN36 371 aaKnown RBP9.74□□□□□ -0.85
TPM3-201ENST00000271850 SMG5Q9UPR3 1016 aaKnown RBP9.74□□□□□ -0.85
TPM3-201ENST00000271850 SLC27A5Q9Y2P5 690 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 PCDHGA2Q9Y5H1 932 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 EPG5Q9HCE0 2579 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 A0A0B4J269 797 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 ANKRD63C9JTQ0 380 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 PRAMEF12O95522 483 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 CLTAP09496 248 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 CPB1P15086 417 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 PSMC3P17980 439 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 CYP3A5P20815 502 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 GJB2P29033 226 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 NMT1P30419 496 aaKnown RBP9.73□□□□□ -0.85
TPM3-201ENST00000271850 MAGEA9P43362 315 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 LILRA4P59901 499 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 SATB1Q01826 763 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 YWHAHQ04917 246 aaPredicted RBP9.73□□□□□ -0.85
TPM3-201ENST00000271850 STRN3Q13033 797 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 GPR17Q13304 367 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 MCM6Q14566 821 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 RSPO4Q2I0M5 234 aaPredicted RBP9.73□□□□□ -0.85
TPM3-201ENST00000271850 RILPL1Q5EBL4 403 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 SPATA1Q5VX52 437 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 JADE1Q6IE81 842 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 Q6ZS52 159 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 USP49Q70CQ1 688 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 MFSD6LQ8IWD5 586 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 ZSWIM2Q8NEG5 633 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 APPL2Q8NEU8 664 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 BORCS6Q96GS4 357 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 ZFYVE19Q96K21 471 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 FAM84AQ96KN4 292 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 LPIN3Q9BQK8 851 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 TRMT61BQ9BVS5 477 aaKnown RBP9.73□□□□□ -0.85
TPM3-201ENST00000271850 BRD9Q9H8M2 597 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 ASAH2Q9NR71 780 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 KCND2Q9NZV8 630 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 TBX20Q9UMR3 447 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 UBQLN1Q9UMX0 589 aaKnown RBP9.73□□□□□ -0.85
TPM3-201ENST00000271850 PIAS3Q9Y6X2 628 aa9.73□□□□□ -0.85
TPM3-201ENST00000271850 TPRP12270 2363 aaKnown RBP9.73□□□□□ -0.85
TPM3-201ENST00000271850 NUP210Q8TEM1 1887 aaPredicted RBP9.72□□□□□ -0.85
TPM3-201ENST00000271850 ANO9A1A5B4 782 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 K7ESF4 209 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 PIRO00625 290 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 ZNF197O14709 1029 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 OGTO15294 1046 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 ATF6P18850 670 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 PLCG1P19174 1290 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 TYMPP19971 482 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 CCNE1P24864 410 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 ADSSP30520 456 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 FCHO2Q0JRZ9 810 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 SRSF5Q13243 272 aaKnown RBP9.72□□□□□ -0.85
TPM3-201ENST00000271850 KARSQ15046 597 aaKnown RBP9.72□□□□□ -0.85
TPM3-201ENST00000271850 ZC2HC1CQ53FD0 456 aaPredicted RBP9.72□□□□□ -0.85
TPM3-201ENST00000271850 CYP4A22Q5TCH4 519 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 C9orf57Q5W0N0 161 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 ARL6IP4Q66PJ3 421 aaKnown RBP9.72□□□□□ -0.85
TPM3-201ENST00000271850 MCTP1Q6DN14 999 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 CRELD2Q6UXH1 353 aaPredicted RBP9.72□□□□□ -0.85
TPM3-201ENST00000271850 DGLUCYQ7Z3D6 616 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 TMEM150AQ86TG1 271 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 LRRTM3Q86VH5 581 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 GPBP1Q86WP2 473 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 EFCAB13Q8IY85 973 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 STKLD1Q8NE28 680 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 DEPDC1BQ8WUY9 529 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 FAM3CQ92520 227 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 IRF7Q92985 503 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 SENP8Q96LD8 212 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 ZNF512Q96ME7 567 aaPredicted RBP9.72□□□□□ -0.85
TPM3-201ENST00000271850 NELL2Q99435 816 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 HINFPQ9BQA5 517 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 LMAN1LQ9HAT1 526 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 ODF2LQ9ULJ1 636 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 MAFFQ9ULX9 164 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 PCDHB3Q9Y5E6 796 aa9.72□□□□□ -0.85
TPM3-201ENST00000271850 KMT2BQ9UMN6 2715 aaPredicted RBP9.72□□□□□ -0.85
TPM3-201ENST00000271850 ASPMQ8IZT6 3477 aa9.71□□□□□ -0.85
TPM3-201ENST00000271850 OTOL1A6NHN0 477 aaPredicted RBP9.71□□□□□ -0.86
TPM3-201ENST00000271850 OR6C75A6NL08 312 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 SLC38A8A6NNN8 435 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 RNF223E7ERA6 249 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 K7ENM7 598 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 HNRNPDLO14979 420 aaKnown RBP9.71□□□□□ -0.86
TPM3-201ENST00000271850 CYP11A1P05108 521 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 LIG4P49917 911 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 SMTNP53814 917 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 ATXN1P54253 815 aaKnown RBP9.71□□□□□ -0.86
TPM3-201ENST00000271850 CYP4F8P98187 520 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 GTF2BQ00403 316 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 PPP2R3AQ06190 1150 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 TNK2Q07912 1038 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms