RNA–Protein interactions for RNA: ENST00000271324.5

CD53-201, Transcript of CD53 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD53, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-201ENST00000271324 ZNF572Q7Z3I7 529 aaPredicted RBP7.07□□□□□ -1.28
CD53-201ENST00000271324 MRPL10Q7Z7H8 261 aaKnown RBP7.07□□□□□ -1.28
CD53-201ENST00000271324 CEP57Q86XR8 500 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 PALB2Q86YC2 1186 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 IFT20Q8IY31 132 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 CCDC170Q8IYT3 715 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 SLC44A3Q8N4M1 653 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 DCLK2Q8N568 766 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 SMG8Q8ND04 991 aaKnown RBP7.07□□□□□ -1.28
CD53-201ENST00000271324 ARMC2Q8NEN0 867 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 TRIM58Q8NG06 486 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 OR8K1Q8NGG5 319 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 ETNPPLQ8TBG4 499 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 GPR152Q8TDT2 470 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 PRPF31Q8WWY3 499 aaKnown RBP7.07□□□□□ -1.28
CD53-201ENST00000271324 ZNF707Q96C28 371 aaPredicted RBP7.07□□□□□ -1.28
CD53-201ENST00000271324 SGSM3Q96HU1 749 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 CAPZA3Q96KX2 299 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 ZFP42Q96MM3 310 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 AIFM3Q96NN9 605 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 GSDMAQ96QA5 445 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 MMS19Q96T76 1030 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 RPP25Q9BUL9 199 aaKnown RBP7.07□□□□□ -1.28
CD53-201ENST00000271324 NUP58Q9BVL2 599 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 EMILIN2Q9BXX0 1053 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 EIF2AQ9BY44 585 aaKnown RBP7.07□□□□□ -1.28
CD53-201ENST00000271324 RSAD1Q9HA92 442 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 SLC40A1Q9NP59 571 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 MRPL17Q9NRX2 175 aaKnown RBP7.07□□□□□ -1.28
CD53-201ENST00000271324 AGPAT5Q9NUQ2 364 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 RMND1Q9NWS8 449 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 CPSF2Q9P2I0 782 aaKnown RBP7.07□□□□□ -1.28
CD53-201ENST00000271324 CACNG4Q9UBN1 327 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 LIMA1Q9UHB6 759 aaKnown RBP7.07□□□□□ -1.28
CD53-201ENST00000271324 SERTAD1Q9UHV2 236 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 HES2Q9Y543 173 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 NID2Q14112 1375 aa7.07□□□□□ -1.28
CD53-201ENST00000271324 M0R2N6 131 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 INPPL1O15357 1258 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 TEX33O43247 280 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 EFEMP2O95967 443 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 SOD2P04179 222 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 ATP1A1P05023 1023 aaKnown RBP7.06□□□□□ -1.28
CD53-201ENST00000271324 SKIP12755 728 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 GLULP15104 373 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 PRLRP16471 622 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 RPL17P18621 184 aaKnown RBP7.06□□□□□ -1.28
CD53-201ENST00000271324 NR1D1P20393 614 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 GCKP35557 465 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 OR1G1P47890 313 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 RCAN1P53805 252 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 NLRP5P59047 1200 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 SSRP1Q08945 709 aaKnown RBP7.06□□□□□ -1.28
CD53-201ENST00000271324 KIF5AQ12840 1032 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 NPY5RQ15761 445 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 Q4G0T1 1027 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 KIAA0319Q5VV43 1072 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 PPP4R3AQ6IN85 833 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 KLHL10Q6JEL2 608 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 C8orf74Q6P047 294 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 CYB5D1Q6P9G0 228 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 C15orf39Q6ZRI6 1047 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 ERMP1Q7Z2K6 904 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 ZNF410Q86VK4 478 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 NLRP14Q86W24 1093 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 NOSTRINQ8IVI9 506 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 COLGALT2Q8IYK4 626 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 TRIM22Q8IYM9 498 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 URGCPQ8TCY9 931 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 NOC3LQ8WTT2 800 aaKnown RBP7.06□□□□□ -1.28
CD53-201ENST00000271324 ATRIPQ8WXE1 791 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.06□□□□□ -1.28
CD53-201ENST00000271324 SMG7Q92540 1137 aaKnown RBP7.06□□□□□ -1.28
CD53-201ENST00000271324 CCDC47Q96A33 483 aaKnown RBP7.06□□□□□ -1.28
CD53-201ENST00000271324 PGBD4Q96DM1 585 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 CPB2Q96IY4 423 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 FAM193BQ96PV7 902 aaPredicted RBP7.06□□□□□ -1.28
CD53-201ENST00000271324 RPS6KC1Q96S38 1066 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 RTP3Q9BQQ7 232 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 FOXQ1Q9C009 403 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 TBC1D17Q9HA65 648 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 WDR6Q9NNW5 1121 aaKnown RBP7.06□□□□□ -1.28
CD53-201ENST00000271324 HOMER3Q9NSC5 361 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 DLGAP2Q9P1A6 1054 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 STIM2Q9P246 746 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 MAGEC2Q9UBF1 373 aaPredicted RBP7.06□□□□□ -1.28
CD53-201ENST00000271324 LUC7L2Q9Y383 392 aaKnown RBP7.06□□□□□ -1.28
CD53-201ENST00000271324 COL4A3BPQ9Y5P4 624 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 CLUHO75153 1309 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 RALGAPA1Q6GYQ0 2036 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 CYP3A7-CYP3A51PA0A087WV96 503 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 A0A1W2PQC6 194 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 KLHL33A6NCF5 533 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 ARL5CA6NH57 179 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 TGM5O43548 720 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 BUB1BO60566 1050 aaPredicted RBP7.06□□□□□ -1.28
CD53-201ENST00000271324 LUC7L3O95232 432 aaKnown RBP7.06□□□□□ -1.28
CD53-201ENST00000271324 LMNAP02545 664 aaKnown RBP7.06□□□□□ -1.28
CD53-201ENST00000271324 IFNAR1P17181 557 aa7.06□□□□□ -1.28
CD53-201ENST00000271324 XBP1P17861 261 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms