RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 FBXO16Q8IX29 292 aaPredicted RBP13.9□□□□□ -0.18
SMG9-201ENST00000270066 USP33Q8TEY7 942 aa13.9□□□□□ -0.18
SMG9-201ENST00000270066 KIAA1683Q9H0B3 1180 aa13.9□□□□□ -0.18
SMG9-201ENST00000270066 METTL5Q9NRN9 209 aaKnown RBP13.9□□□□□ -0.18
SMG9-201ENST00000270066 RAB6BQ9NRW1 208 aa13.9□□□□□ -0.18
SMG9-201ENST00000270066 APRTP07741 180 aa13.9□□□□□ -0.18
SMG9-201ENST00000270066 ARP10275 920 aa13.9□□□□□ -0.18
SMG9-201ENST00000270066 FXR1P51114 621 aaKnown RBP eCLIP13.9□□□□□ -0.18
SMG9-201ENST00000270066 BYSLQ13895 437 aaKnown RBP13.9□□□□□ -0.18
SMG9-201ENST00000270066 ANKMY2Q8IV38 441 aa13.9□□□□□ -0.18
SMG9-201ENST00000270066 CALML6Q8TD86 181 aa13.9□□□□□ -0.18
SMG9-201ENST00000270066 RIN2Q8WYP3 895 aaPredicted RBP13.9□□□□□ -0.18
SMG9-201ENST00000270066 KIFC3Q9BVG8 833 aa13.9□□□□□ -0.18
SMG9-201ENST00000270066 XPO7Q9UIA9 1087 aaKnown RBP13.9□□□□□ -0.18
SMG9-201ENST00000270066 SPAG6O75602 509 aa13.9□□□□□ -0.18
SMG9-201ENST00000270066 PGK2P07205 417 aa13.9□□□□□ -0.18
SMG9-201ENST00000270066 BRD2P25440 801 aaKnown RBP13.9□□□□□ -0.18
SMG9-201ENST00000270066 DSG3P32926 999 aa13.9□□□□□ -0.18
SMG9-201ENST00000270066 C10orf120Q5SQS8 335 aa13.9□□□□□ -0.18
SMG9-201ENST00000270066 MTBPQ96DY7 904 aa13.9□□□□□ -0.18
SMG9-201ENST00000270066 TMEM169Q96HH4 297 aa13.9□□□□□ -0.18
SMG9-201ENST00000270066 AGAP3Q96P47 875 aa13.9□□□□□ -0.18
SMG9-201ENST00000270066 RIOX1Q9H6W3 641 aa13.9□□□□□ -0.18
SMG9-201ENST00000270066 AGO4Q9HCK5 861 aaKnown RBP13.9□□□□□ -0.18
SMG9-201ENST00000270066 ARHGEF38Q9NXL2 777 aa13.9□□□□□ -0.18
SMG9-201ENST00000270066 ZC3H11AO75152 810 aaKnown RBP eCLIP13.89□□□□□ -0.19
SMG9-201ENST00000270066 EGFRP00533 1210 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 SEC23AQ15436 765 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 SDE2Q6IQ49 451 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 CHSY1Q86X52 802 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 PI4K2AQ9BTU6 479 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 OSBPL8Q9BZF1 889 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 IL25Q9H293 177 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 ZC3H7BQ9UGR2 993 aaKnown RBP13.89□□□□□ -0.19
SMG9-201ENST00000270066 MROH2AA6NES4 1674 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 MANSC4A6NHS7 340 aaPredicted RBP13.89□□□□□ -0.19
SMG9-201ENST00000270066 ENO4A6NNW6 628 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 TLR2O60603 784 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 CCDC22O60826 627 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 GRAP2O75791 330 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 NCAM1P13591 858 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 OAZ1P54368 228 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 KCNA1Q09470 495 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 CCDC15Q0P6D6 951 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 KDELC2Q7Z4H8 507 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 MFN1Q8IWA4 741 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 DDIASQ8IXT1 998 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 NRBF2Q96F24 287 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 KDM4CQ9H3R0 1056 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 NDUFS3O75489 264 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 FGFR4P22455 802 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 EEF1B2P24534 225 aaKnown RBP13.89□□□□□ -0.19
SMG9-201ENST00000270066 HSPA9P38646 679 aaKnown RBP13.89□□□□□ -0.19
SMG9-201ENST00000270066 ZBTB17Q13105 803 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 ANKS3Q6ZW76 656 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 C4orf19Q8IY42 314 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 SH2D3CQ8N5H7 860 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 DSEQ9UL01 958 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 SMG5Q9UPR3 1016 aaKnown RBP13.89□□□□□ -0.19
SMG9-201ENST00000270066 PRG3Q9Y2Y8 225 aaPredicted RBP13.89□□□□□ -0.19
SMG9-201ENST00000270066 PXDNQ92626 1479 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 HOXC6P09630 235 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 KCNA2P16389 499 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 COMTP21964 271 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 ACAD10Q6JQN1 1059 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 METTL7BQ6UX53 244 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 SPATC1LQ9H0A9 340 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 CASS4Q9NQ75 786 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 E2F6O75461 281 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 RALBP11234 206 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 GFAPP14136 432 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 AKT1P31749 480 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 GPC2Q8N158 579 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 PTPRN2Q92932 1015 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 ASPSCR1Q9BZE9 553 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 SLC7A5P2Q9GIP4 190 aa13.89□□□□□ -0.19
SMG9-201ENST00000270066 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.89□□□□□ -0.19
SMG9-201ENST00000270066 TSR3Q9UJK0 312 aaKnown RBP13.89□□□□□ -0.19
SMG9-201ENST00000270066 PRPF4O43172 522 aaKnown RBP eCLIP13.88□□□□□ -0.19
SMG9-201ENST00000270066 SEPT8Q92599 483 aa13.88□□□□□ -0.19
SMG9-201ENST00000270066 LRRC37BQ96QE4 947 aa13.88□□□□□ -0.19
SMG9-201ENST00000270066 RBM15Q96T37 977 aaKnown RBP eCLIP13.88□□□□□ -0.19
SMG9-201ENST00000270066 CGRRF1Q99675 332 aa13.88□□□□□ -0.19
SMG9-201ENST00000270066 MEFVO15553 781 aaPredicted RBP13.88□□□□□ -0.19
SMG9-201ENST00000270066 AGTP01019 485 aa13.88□□□□□ -0.19
SMG9-201ENST00000270066 BOLA3Q53S33 107 aa13.88□□□□□ -0.19
SMG9-201ENST00000270066 ZBTB41Q5SVQ8 909 aa13.88□□□□□ -0.19
SMG9-201ENST00000270066 SYTL5Q8TDW5 730 aaPredicted RBP13.88□□□□□ -0.19
SMG9-201ENST00000270066 SLC26A7Q8TE54 656 aa13.88□□□□□ -0.19
SMG9-201ENST00000270066 ABI2Q9NYB9 513 aaPredicted RBP13.88□□□□□ -0.19
SMG9-201ENST00000270066 DBR1Q9UK59 544 aaKnown RBP13.88□□□□□ -0.19
SMG9-201ENST00000270066 PCDHGB4Q9UN71 923 aa13.88□□□□□ -0.19
SMG9-201ENST00000270066 VDRP11473 427 aa13.88□□□□□ -0.19
SMG9-201ENST00000270066 CLCN3P51790 818 aa13.88□□□□□ -0.19
SMG9-201ENST00000270066 LZICQ8WZA0 190 aa13.88□□□□□ -0.19
SMG9-201ENST00000270066 LRRC1Q9BTT6 524 aa13.88□□□□□ -0.19
SMG9-201ENST00000270066 TRABDQ9H4I3 376 aa13.88□□□□□ -0.19
SMG9-201ENST00000270066 ECT2Q9H8V3 914 aa13.88□□□□□ -0.19
SMG9-201ENST00000270066 GGT7Q9UJ14 662 aa13.88□□□□□ -0.19
SMG9-201ENST00000270066 TGFB3P10600 412 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms