RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 DENND1BQ6P3S1 775 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 DDX27Q96GQ7 796 aaKnown RBP17.66■□□□□ 0.42
CCDC40-201ENST00000269318 ZMAT2Q96NC0 199 aaKnown RBP17.66■□□□□ 0.42
CCDC40-201ENST00000269318 ELOVL4Q9GZR5 314 aa17.66■□□□□ 0.42
CCDC40-201ENST00000269318 TCRBV7S2A1N4TA0A589 114 aa17.65■□□□□ 0.42
CCDC40-201ENST00000269318 C17orf102A2RUQ5 167 aa17.65■□□□□ 0.42
CCDC40-201ENST00000269318 TLR3O15455 904 aaKnown RBP17.65■□□□□ 0.42
CCDC40-201ENST00000269318 DUSP11O75319 330 aaKnown RBP17.65■□□□□ 0.42
CCDC40-201ENST00000269318 GJB6O95452 261 aa17.65■□□□□ 0.42
CCDC40-201ENST00000269318 P4HA1P13674 534 aa17.65■□□□□ 0.42
CCDC40-201ENST00000269318 AXLP30530 894 aa17.65■□□□□ 0.42
CCDC40-201ENST00000269318 MAN1A1P33908 653 aa17.65■□□□□ 0.42
CCDC40-201ENST00000269318 INCA1Q0VD86 236 aa17.65■□□□□ 0.42
CCDC40-201ENST00000269318 ZBTB6Q15916 424 aa17.65■□□□□ 0.42
CCDC40-201ENST00000269318 CYP1B1Q16678 543 aa17.65■□□□□ 0.42
CCDC40-201ENST00000269318 PPP1R15BQ5SWA1 713 aa17.65■□□□□ 0.42
CCDC40-201ENST00000269318 TSEN2Q8NCE0 465 aaKnown RBP17.65■□□□□ 0.42
CCDC40-201ENST00000269318 MYADML2A6NDP7 307 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 TMEM191CA6NGB0 347 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 AGPSO00116 658 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 MED7O43513 233 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 CD19P15391 556 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 RPL7AP62424 266 aaKnown RBP17.64■□□□□ 0.41
CCDC40-201ENST00000269318 PTPN11Q06124 597 aaPredicted RBP17.64■□□□□ 0.41
CCDC40-201ENST00000269318 ALKAL1Q6UXT8 129 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 MREGQ8N565 214 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 TMEM176AQ96HP8 235 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 FAM124BQ9H5Z6 455 aaPredicted RBP17.64■□□□□ 0.41
CCDC40-201ENST00000269318 MED4Q9NPJ6 270 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 CEP83Q9Y592 693 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 POLR3GO15318 223 aaPredicted RBP17.64■□□□□ 0.41
CCDC40-201ENST00000269318 PSTPIP1O43586 416 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 SYF2O95926 243 aaKnown RBP17.64■□□□□ 0.41
CCDC40-201ENST00000269318 CYBAP13498 195 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 CHRNA3P32297 505 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 DR1Q01658 176 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 ORC1Q13415 861 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 DHX34Q14147 1143 aaKnown RBP17.64■□□□□ 0.41
CCDC40-201ENST00000269318 DAB2IPQ5VWQ8 1189 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 DDX42Q86XP3 938 aaKnown RBP eCLIP17.64■□□□□ 0.41
CCDC40-201ENST00000269318 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.64■□□□□ 0.41
CCDC40-201ENST00000269318 ZBTB9Q96C00 473 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 ARHGAP39Q9C0H5 1083 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 PCYOX1Q9UHG3 505 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 CYTH4Q9UIA0 394 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 HES2Q9Y543 173 aa17.64■□□□□ 0.41
CCDC40-201ENST00000269318 O00370 1275 aa17.63■□□□□ 0.41
CCDC40-201ENST00000269318 FSCN2O14926 492 aa17.63■□□□□ 0.41
CCDC40-201ENST00000269318 RARAP10276 462 aa17.63■□□□□ 0.41
CCDC40-201ENST00000269318 PTGIRP43119 386 aa17.63■□□□□ 0.41
CCDC40-201ENST00000269318 TAS2R40P59535 323 aa17.63■□□□□ 0.41
CCDC40-201ENST00000269318 ZNF252P-AS1Q0IIN9 211 aa17.63■□□□□ 0.41
CCDC40-201ENST00000269318 KCTD19Q17RG1 926 aaPredicted RBP17.63■□□□□ 0.41
CCDC40-201ENST00000269318 PTPN20Q4JDL3 420 aa17.63■□□□□ 0.41
CCDC40-201ENST00000269318 TTC27Q6P3X3 843 aa17.63■□□□□ 0.41
CCDC40-201ENST00000269318 ERICH1Q86X53 443 aa17.63■□□□□ 0.41
CCDC40-201ENST00000269318 NME8Q8N427 588 aa17.63■□□□□ 0.41
CCDC40-201ENST00000269318 TRIB2Q92519 343 aa17.63■□□□□ 0.41
CCDC40-201ENST00000269318 C18orf8Q96DM3 657 aa17.63■□□□□ 0.41
CCDC40-201ENST00000269318 TRIM51Q9BSJ1 452 aa17.63■□□□□ 0.41
CCDC40-201ENST00000269318 PLVAPQ9BX97 442 aa17.63■□□□□ 0.41
CCDC40-201ENST00000269318 NXF3Q9H4D5 531 aaKnown RBP17.63■□□□□ 0.41
CCDC40-201ENST00000269318 CNTN3Q9P232 1028 aa17.63■□□□□ 0.41
CCDC40-201ENST00000269318 IP6K2Q9UHH9 426 aa17.63■□□□□ 0.41
CCDC40-201ENST00000269318 BARX2Q9UMQ3 279 aaPredicted RBP17.63■□□□□ 0.41
CCDC40-201ENST00000269318 TRIP12Q14669 1992 aaPredicted RBP17.62■□□□□ 0.41
CCDC40-201ENST00000269318 FAM187AA6NFU0 413 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 DAPK3O43293 454 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 GNAT1P11488 350 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 CRYBB1P53674 252 aaPredicted RBP17.62■□□□□ 0.41
CCDC40-201ENST00000269318 FCGRTP55899 365 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 GJA9P57773 515 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 DNAJC24Q6P3W2 148 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 RHOT1Q8IXI2 618 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 C7orf31Q8N865 590 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 C12orf50Q8NA57 414 aaPredicted RBP17.62■□□□□ 0.41
CCDC40-201ENST00000269318 C3orf20Q8ND61 904 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 FAM71BQ8TC56 605 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 NEUROG2Q9H2A3 272 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 ABT1Q9ULW3 272 aaKnown RBP17.62■□□□□ 0.41
CCDC40-201ENST00000269318 GABRQQ9UN88 632 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 UTP11Q9Y3A2 253 aaKnown RBP17.62■□□□□ 0.41
CCDC40-201ENST00000269318 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.62■□□□□ 0.41
CCDC40-201ENST00000269318 GOLGA6BA6NDN3 693 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 KPNA6O60684 536 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 RECQL4O94761 1208 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 C6orf222P0C671 652 aaPredicted RBP17.62■□□□□ 0.41
CCDC40-201ENST00000269318 GGCXP38435 758 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 PSMC4P43686 418 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 YARSP54577 528 aaKnown RBP17.62■□□□□ 0.41
CCDC40-201ENST00000269318 TERF2Q15554 542 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 UBXN11Q5T124 520 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 DUPD1Q68J44 220 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 JAMLQ86YT9 394 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 MAGOHBQ96A72 148 aaKnown RBP17.62■□□□□ 0.41
CCDC40-201ENST00000269318 HHIPL1Q96JK4 782 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 RAB17Q9H0T7 212 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 TUBGCP4Q9UGJ1 667 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 MTUS1Q9ULD2 1270 aa17.62■□□□□ 0.41
CCDC40-201ENST00000269318 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms