RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 PAEPP09466 180 aa21.88■■□□□ 1.09
LYSMD2-201ENST00000267838 THPOP40225 353 aa21.88■■□□□ 1.09
LYSMD2-201ENST00000267838 RAD23BP54727 409 aa21.88■■□□□ 1.09
LYSMD2-201ENST00000267838 FAM71BQ8TC56 605 aa21.88■■□□□ 1.09
LYSMD2-201ENST00000267838 TFAP2BQ92481 460 aa21.88■■□□□ 1.09
LYSMD2-201ENST00000267838 VCPIP1Q96JH7 1222 aa21.88■■□□□ 1.09
LYSMD2-201ENST00000267838 PCDHGC3Q9UN70 934 aa21.88■■□□□ 1.09
LYSMD2-201ENST00000267838 ALG6Q9Y672 507 aa21.88■■□□□ 1.09
LYSMD2-201ENST00000267838 SMIM28A0A1B0GU29 152 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 CILPO75339 1184 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 LSM8O95777 96 aaKnown RBP21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 KCNE1P15382 129 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 RRM1P23921 792 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 PTPN11Q06124 597 aaPredicted RBP21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 C2orf54Q08AI8 447 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 NFX1Q12986 1120 aaKnown RBP21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 SPATA4Q8NEY3 305 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 WHAMMQ8TF30 809 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 FAM124BQ9H5Z6 455 aaPredicted RBP21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 CHST12Q9NRB3 414 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 ADAM22Q9P0K1 906 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 ADAM21Q9UKJ8 722 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 TMEM110-MUSTN1A8MSY1 372 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 PPEF2O14830 753 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 TLR3O15455 904 aaKnown RBP21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 PRMT2P55345 433 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 PTK7Q13308 1070 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 MESDQ14696 234 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 LIN9Q5TKA1 542 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 LRRC52Q8N7C0 313 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 RUBCNQ92622 972 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 C11orf70Q9BRQ4 267 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 SELENOOQ9BVL4 669 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 HMX1Q9NP08 348 aaPredicted RBP21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 RNF19AQ9NV58 838 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 SAGE1Q9NXZ1 904 aa21.87■■□□□ 1.09
LYSMD2-201ENST00000267838 MOXD2PA6NHM9 499 aa21.86■■□□□ 1.09
LYSMD2-201ENST00000267838 DDX3YO15523 660 aaKnown RBP21.86■■□□□ 1.09
LYSMD2-201ENST00000267838 MED7O43513 233 aa21.86■■□□□ 1.09
LYSMD2-201ENST00000267838 XPOTO43592 962 aaKnown RBP21.86■■□□□ 1.09
LYSMD2-201ENST00000267838 CD4P01730 458 aa21.86■■□□□ 1.09
LYSMD2-201ENST00000267838 CD19P15391 556 aa21.86■■□□□ 1.09
LYSMD2-201ENST00000267838 C1QBPQ07021 282 aaKnown RBP21.86■■□□□ 1.09
LYSMD2-201ENST00000267838 C9orf57Q5W0N0 161 aa21.86■■□□□ 1.09
LYSMD2-201ENST00000267838 CCDC70Q6NSX1 233 aa21.86■■□□□ 1.09
LYSMD2-201ENST00000267838 TTC39CQ8N584 583 aa21.86■■□□□ 1.09
LYSMD2-201ENST00000267838 SLC4A11Q8NBS3 891 aa21.86■■□□□ 1.09
LYSMD2-201ENST00000267838 ARRDC4Q8NCT1 418 aa21.86■■□□□ 1.09
LYSMD2-201ENST00000267838 TWNKQ96RR1 684 aa21.86■■□□□ 1.09
LYSMD2-201ENST00000267838 RPS6KC1Q96S38 1066 aa21.86■■□□□ 1.09
LYSMD2-201ENST00000267838 ELOVL4Q9GZR5 314 aa21.86■■□□□ 1.09
LYSMD2-201ENST00000267838 CWC15Q9P013 229 aaKnown RBP21.86■■□□□ 1.09
LYSMD2-201ENST00000267838 HMGXB4Q9UGU5 601 aa21.86■■□□□ 1.09
LYSMD2-201ENST00000267838 NOD1Q9Y239 953 aa21.86■■□□□ 1.09
LYSMD2-201ENST00000267838 GPR182O15218 404 aa21.85■■□□□ 1.09
LYSMD2-201ENST00000267838 GRK4P32298 578 aa21.85■■□□□ 1.09
LYSMD2-201ENST00000267838 CDH5P33151 784 aaPredicted RBP21.85■■□□□ 1.09
LYSMD2-201ENST00000267838 INCA1Q0VD86 236 aa21.85■■□□□ 1.09
LYSMD2-201ENST00000267838 PTP4A2Q12974 167 aa21.85■■□□□ 1.09
LYSMD2-201ENST00000267838 C2CD6Q53TS8 623 aa21.85■■□□□ 1.09
LYSMD2-201ENST00000267838 LHX8Q68G74 356 aa21.85■■□□□ 1.09
LYSMD2-201ENST00000267838 MMS22LQ6ZRQ5 1243 aa21.85■■□□□ 1.09
LYSMD2-201ENST00000267838 TMEM35BQ8NCS4 154 aa21.85■■□□□ 1.09
LYSMD2-201ENST00000267838 TMEM176AQ96HP8 235 aa21.85■■□□□ 1.09
LYSMD2-201ENST00000267838 BTBD6Q96KE9 485 aa21.85■■□□□ 1.09
LYSMD2-201ENST00000267838 GLT1D1Q96MS3 346 aa21.85■■□□□ 1.09
LYSMD2-201ENST00000267838 TSEN34Q9BSV6 310 aaKnown RBP21.85■■□□□ 1.09
LYSMD2-201ENST00000267838 ZNF518BQ9C0D4 1074 aa21.85■■□□□ 1.09
LYSMD2-201ENST00000267838 TRMT13Q9NUP7 481 aaKnown RBP21.85■■□□□ 1.09
LYSMD2-201ENST00000267838 BARX2Q9UMQ3 279 aaPredicted RBP21.85■■□□□ 1.09
LYSMD2-201ENST00000267838 SCN1AP35498 2009 aa21.85■■□□□ 1.09
LYSMD2-201ENST00000267838 FRMPD3Q5JV73 1810 aa21.84■■□□□ 1.09
LYSMD2-201ENST00000267838 CEP104O60308 925 aa21.84■■□□□ 1.09
LYSMD2-201ENST00000267838 ORC1Q13415 861 aa21.84■■□□□ 1.09
LYSMD2-201ENST00000267838 PHLDB2Q86SQ0 1253 aa21.84■■□□□ 1.09
LYSMD2-201ENST00000267838 MMGT1Q8N4V1 131 aa21.84■■□□□ 1.09
LYSMD2-201ENST00000267838 C1orf131Q8NDD1 294 aaKnown RBP21.84■■□□□ 1.09
LYSMD2-201ENST00000267838 FAM105AQ9NUU6 356 aa21.84■■□□□ 1.09
LYSMD2-201ENST00000267838 VPS18Q9P253 973 aa21.84■■□□□ 1.09
LYSMD2-201ENST00000267838 CEP83Q9Y592 693 aa21.84■■□□□ 1.09
LYSMD2-201ENST00000267838 MIF4GDA9UHW6 222 aaKnown RBP21.84■■□□□ 1.09
LYSMD2-201ENST00000267838 ATF7P17544 494 aaPredicted RBP21.84■■□□□ 1.09
LYSMD2-201ENST00000267838 COMTP21964 271 aa21.84■■□□□ 1.09
LYSMD2-201ENST00000267838 MMP8P22894 467 aa21.84■■□□□ 1.09
LYSMD2-201ENST00000267838 HNRNPH2P55795 449 aaKnown RBP21.84■■□□□ 1.09
LYSMD2-201ENST00000267838 ACTRT1Q8TDG2 376 aa21.84■■□□□ 1.09
LYSMD2-201ENST00000267838 AGO3Q9H9G7 860 aaKnown RBP21.84■■□□□ 1.09
LYSMD2-201ENST00000267838 ANAPC7Q9UJX3 599 aa21.84■■□□□ 1.09
LYSMD2-201ENST00000267838 SNX9Q9Y5X1 595 aa21.84■■□□□ 1.09
LYSMD2-201ENST00000267838 PIRO00625 290 aa21.83■■□□□ 1.09
LYSMD2-201ENST00000267838 CYP3A5P20815 502 aa21.83■■□□□ 1.09
LYSMD2-201ENST00000267838 NDST1P52848 882 aa21.83■■□□□ 1.09
LYSMD2-201ENST00000267838 TRIM71Q2Q1W2 868 aaKnown RBP21.83■■□□□ 1.09
LYSMD2-201ENST00000267838 FBXO47Q5MNV8 452 aa21.83■■□□□ 1.09
LYSMD2-201ENST00000267838 LLGL2Q6P1M3 1020 aa21.83■■□□□ 1.09
LYSMD2-201ENST00000267838 WDTC1Q8N5D0 677 aa21.83■■□□□ 1.09
LYSMD2-201ENST00000267838 LHX5Q9H2C1 402 aa21.83■■□□□ 1.09
LYSMD2-201ENST00000267838 ERVK-5Q9HDB9 667 aa21.83■■□□□ 1.09
LYSMD2-201ENST00000267838 CALB1P05937 261 aa21.82■■□□□ 1.08
LYSMD2-201ENST00000267838 AARSP49588 968 aaKnown RBP eCLIP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms