RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 C18orf25Q96B23 403 aaPredicted RBP9.88□□□□□ -0.83
SSR3-201ENST00000265044 GOLGA2P5Q9HBQ8 144 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 SRRDQ9UH36 339 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 ZNF148Q9UQR1 794 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 GNEQ9Y223 722 aaKnown RBP9.88□□□□□ -0.83
SSR3-201ENST00000265044 A0A0A6YYK5 440 aaPredicted RBP9.87□□□□□ -0.83
SSR3-201ENST00000265044 CASTOR2A6NHX0 329 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 PI4K2BG5E9Z4 385 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 THP07101 528 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 CD52P31358 61 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 GRM5P41594 1212 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 KRT81Q14533 505 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 CFAP58Q5T655 872 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 LLGL2Q6P1M3 1020 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 TAB3Q8N5C8 712 aaPredicted RBP9.87□□□□□ -0.83
SSR3-201ENST00000265044 HASPINQ8TF76 798 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 HAUS1Q96CS2 278 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 RAB17Q9H0T7 212 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 RNF208Q9H0X6 261 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 TIMM13Q9Y5L4 95 aaPredicted RBP9.87□□□□□ -0.83
SSR3-201ENST00000265044 GAS8O95995 478 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 TM4SF4P48230 202 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 PPP2R5EQ16537 467 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 CEP57Q86XR8 500 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 MAIP1Q8WWC4 291 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 TNIP3Q96KP6 325 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 ZFP42Q96MM3 310 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 ADAM2Q99965 735 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 CCDC113Q9H0I3 377 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 MTRF1LQ9UGC7 380 aaKnown RBP9.87□□□□□ -0.83
SSR3-201ENST00000265044 IP6K2Q9UHH9 426 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 CCDC188H7C350 402 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 PDE2AO00408 941 aaPredicted RBP9.87□□□□□ -0.83
SSR3-201ENST00000265044 SART1O43290 800 aaKnown RBP9.87□□□□□ -0.83
SSR3-201ENST00000265044 LCP1P13796 627 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 GRK4P32298 578 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 MLH1P40692 756 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 SV2CQ496J9 727 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 CC2D1AQ6P1N0 951 aaPredicted RBP9.87□□□□□ -0.83
SSR3-201ENST00000265044 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.87□□□□□ -0.83
SSR3-201ENST00000265044 ZNF771Q7L3S4 317 aaPredicted RBP9.87□□□□□ -0.83
SSR3-201ENST00000265044 RHOT1Q8IXI2 618 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 SIX6OS1Q8N1H7 587 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 FEZF2Q8TBJ5 459 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 HSPH1Q92598 858 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 KAT2BQ92831 832 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 PGBD4Q96DM1 585 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 SLC38A7Q9NVC3 462 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 GJD2Q9UKL4 321 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 BARX2Q9UMQ3 279 aaPredicted RBP9.87□□□□□ -0.83
SSR3-201ENST00000265044 NFU1Q9UMS0 254 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 C2CD2Q9Y426 696 aa9.87□□□□□ -0.83
SSR3-201ENST00000265044 SMIM23A6NLE4 172 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 FANCGO15287 622 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 PRLRP16471 622 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 TRIP13Q15645 432 aaPredicted RBP9.86□□□□□ -0.83
SSR3-201ENST00000265044 NT5DC3Q86UY8 548 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 CREG2Q8IUH2 290 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 KCTD6Q8NC69 237 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 CYP3A43Q9HB55 503 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 CREBZFQ9NS37 354 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 TUBGCP4Q9UGJ1 667 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 FEZ2Q9UHY8 353 aaPredicted RBP9.86□□□□□ -0.83
SSR3-201ENST00000265044 Q9Y3F1 56 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 DOCK5Q9H7D0 1870 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 TLDC2A0PJX2 215 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 PMM2O15305 246 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 PQBP1O60828 265 aaKnown RBP9.86□□□□□ -0.83
SSR3-201ENST00000265044 UPP2O95045 317 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 VDRP11473 427 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 APLP1P51693 650 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 GOLGA7BQ2TAP0 167 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 GLB1LQ6UWU2 654 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 ZNF710Q8N1W2 664 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 EMC1Q8N766 993 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 USP38Q8NB14 1042 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 ISCUQ9H1K1 167 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 TRMT13Q9NUP7 481 aaKnown RBP9.86□□□□□ -0.83
SSR3-201ENST00000265044 PRG3Q9Y2Y8 225 aaPredicted RBP9.86□□□□□ -0.83
SSR3-201ENST00000265044 IPPQ9Y573 584 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 KPNA7A9QM74 516 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 CYB561D2O14569 222 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 DAPK3O43293 454 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 PRPSAP2O60256 369 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 NEBLO76041 1014 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 ACAT1P24752 427 aaKnown RBP9.86□□□□□ -0.83
SSR3-201ENST00000265044 ADCY8P40145 1251 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 PNPLA4P41247 253 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 PLTPP55058 493 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 DR1Q01658 176 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 GDF6Q6KF10 455 aaPredicted RBP9.86□□□□□ -0.83
SSR3-201ENST00000265044 NT5DC4Q86YG4 428 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 C1orf54Q8WWF1 131 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 ACSF2Q96CM8 615 aaPredicted RBP9.86□□□□□ -0.83
SSR3-201ENST00000265044 CALR3Q96L12 384 aaKnown RBP9.86□□□□□ -0.83
SSR3-201ENST00000265044 PLEKHA5Q9HAU0 1116 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 NOCTQ9UK39 431 aaKnown RBP9.86□□□□□ -0.83
SSR3-201ENST00000265044 TSPAN16Q9UKR8 245 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 SCN4AP35499 1836 aa9.86□□□□□ -0.83
SSR3-201ENST00000265044 SMIM28A0A1B0GU29 152 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms