RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 KBTBD7Q8WVZ9 684 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 HERVK_113Q902F9 699 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 DDX27Q96GQ7 796 aaKnown RBP10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 UROC1Q96N76 676 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 ZSWIM1Q9BR11 485 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 DESI2Q9BSY9 194 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 CWH43Q9H720 699 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 RC3H2Q9HBD1 1191 aaKnown RBP10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 SPTLC3Q9NUV7 552 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 GDAP2Q9NXN4 497 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 FAN1Q9Y2M0 1017 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 DAAM1Q9Y4D1 1078 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 A0A0U1RQJ8 604 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 SNPHO15079 494 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 HUS1O60921 280 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 CILPO75339 1184 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 ALDH2P05091 517 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 GALTP07902 379 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 CYP11B1P15538 503 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 CHRNB2P17787 502 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 PRKCIP41743 596 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 CYP27A1Q02318 531 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 BTG3Q14201 252 aaPredicted RBP10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 CCDC142Q17RM4 750 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 SPOUT1Q5T280 376 aaKnown RBP10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 LIMS2Q7Z4I7 341 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 PALB2Q86YC2 1186 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 TMTC1Q8IUR5 882 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 LRRC43Q8N309 656 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 SLC4A11Q8NBS3 891 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 ACRBPQ8NEB7 543 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 APPL2Q8NEU8 664 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 OR6B3Q8NGW1 331 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 EPS8L1Q8TE68 723 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 ATRIPQ8WXE1 791 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 RSPH1Q8WYR4 309 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 TFAP2BQ92481 460 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 B3GALT6Q96L58 329 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 FAM81BQ96LP2 452 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 YME1L1Q96TA2 773 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 ZBED2Q9BTP6 218 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 MRPL9Q9BYD2 267 aaKnown RBP10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 DPEP3Q9H4B8 488 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 CYP3A43Q9HB55 503 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 MARCH5Q9NX47 278 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 ADAMTS1Q9UHI8 967 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 PUF60Q9UHX1 559 aaKnown RBP10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 TFR2Q9UP52 801 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 CNTN6Q9UQ52 1028 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 MRPL42Q9Y6G3 142 aaKnown RBP10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 SLC4A7Q9Y6M7 1214 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 VWA8A3KMH1 1905 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 KIAA1671Q9BY89 1806 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 A0A087X0T9 212 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 GRXCR1A8MXD5 290 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 ZNF263O14978 683 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 ATP2C2O75185 946 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 TADA2AO75478 443 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 GJB5O95377 273 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 MMEP08473 750 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 FAM228BP0C875 321 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 ACAT1P24752 427 aaKnown RBP10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 BRD2P25440 801 aaKnown RBP10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 GNL1P36915 607 aaPredicted RBP10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 AARSP49588 968 aaKnown RBP eCLIP10.39□□□□□ -0.754e-6■■□□□ 11.6
SNRNP40-201ENST00000263694 ZNF132P52740 706 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 NUBP1P53384 320 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 RABGGTBP53611 331 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 CDK17Q00537 523 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 GFPT1Q06210 699 aaPredicted RBP10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 MMRN1Q13201 1228 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 SHHQ15465 462 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 ASTE1Q2TB18 679 aaPredicted RBP10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 FAM109BQ6ICB4 259 aaPredicted RBP10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 DPH6Q7L8W6 267 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 TAS1R1Q7RTX1 841 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 ACOT1Q86TX2 421 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 GLYCTKQ8IVS8 523 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 ADGRF2Q8IZF7 708 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 C12orf29Q8N999 325 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 CCDC112Q8NEF3 446 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 LNX1Q8TBB1 728 aaPredicted RBP10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 DDX1Q92499 740 aaKnown RBP10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 JAKMIP2Q96AA8 810 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 CCDC42Q96M95 316 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 HEXIM2Q96MH2 286 aaKnown RBP10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 PCDHB18PQ96TA0 734 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 AGPAT1Q99943 283 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 SYT11Q9BT88 431 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 GPR62Q9BZJ7 368 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 SNX25Q9H3E2 840 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 SEPT11Q9NVA2 429 aaKnown RBP10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 NOCTQ9UK39 431 aaKnown RBP10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 BARX2Q9UMQ3 279 aaPredicted RBP10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 NR2E3Q9Y5X4 410 aa10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 EPN1Q9Y6I3 576 aaPredicted RBP10.39□□□□□ -0.75
SNRNP40-201ENST00000263694 TSC2P49815 1807 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 LCHNA4D1U4 455 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 A8MXQ7 604 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms