RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 SPATA2LQ8IUW3 424 aaPredicted RBP13.44□□□□□ -0.26
CLNS1A-201ENST00000263309 GLYCTKQ8IVS8 523 aa13.44□□□□□ -0.26
CLNS1A-201ENST00000263309 FAM200AQ8TCP9 573 aa13.44□□□□□ -0.26
CLNS1A-201ENST00000263309 AUTS2Q8WXX7 1259 aa13.44□□□□□ -0.26
CLNS1A-201ENST00000263309 NT5C1BQ96P26 610 aa13.44□□□□□ -0.26
CLNS1A-201ENST00000263309 TUBGCP2Q9BSJ2 902 aa13.44□□□□□ -0.26
CLNS1A-201ENST00000263309 DNAJC25Q9H1X3 360 aa13.44□□□□□ -0.26
CLNS1A-201ENST00000263309 CXCL16Q9H2A7 254 aa13.44□□□□□ -0.26
CLNS1A-201ENST00000263309 VRTNQ9H8Y1 702 aa13.44□□□□□ -0.26
CLNS1A-201ENST00000263309 SFXN1Q9H9B4 322 aa13.44□□□□□ -0.26
CLNS1A-201ENST00000263309 THEGQ9P2T0 379 aa13.44□□□□□ -0.26
CLNS1A-201ENST00000263309 CDH9Q9ULB4 789 aa13.44□□□□□ -0.26
CLNS1A-201ENST00000263309 PMM2O15305 246 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 HNRNPA1P09651 372 aaKnown RBP eCLIP13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 EPHB3P54753 998 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 DLG4P78352 724 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 MRPS5P82675 430 aaKnown RBP13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 ZSCAN23Q3MJ62 389 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 VWA3BQ502W6 1294 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 SLC8B1Q6J4K2 584 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 TMEM184AQ6ZMB5 413 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 ENOSF1Q7L5Y1 443 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 SPRED2Q7Z698 418 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 ITIH5Q86UX2 942 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 UNC93AQ86WB7 457 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 FMNL3Q8IVF7 1028 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 RNF168Q8IYW5 571 aaPredicted RBP13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 KREMEN2Q8NCW0 462 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 C3orf58Q8NDZ4 430 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 SPPL2BQ8TCT7 592 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 BCL7CQ8WUZ0 217 aaPredicted RBP13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 ATXN2LQ8WWM7 1075 aaKnown RBP13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 ZNF516Q92618 1163 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 ZNF512Q96ME7 567 aaPredicted RBP13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 NECTIN4Q96NY8 510 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 TSPY26PQ9H489 355 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 CYP4F11Q9HBI6 524 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 ZDHHC7Q9NXF8 308 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 HSFX1Q9UBD0 423 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 CACNG4Q9UBN1 327 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 CD207Q9UJ71 328 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 FBXL5Q9UKA1 691 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 PCDHB5Q9Y5E4 795 aa13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 TIMM13Q9Y5L4 95 aaPredicted RBP13.43□□□□□ -0.26
CLNS1A-201ENST00000263309 B4GALT3O60512 393 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 LILRB3O75022 631 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 FGF19O95750 216 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 SERPINC1P01008 464 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 ATF2P15336 505 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 WARSP23381 471 aaKnown RBP13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 ANXA13P27216 316 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 MTHFRP42898 656 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 CLCN4P51793 760 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 MFAP3P55082 362 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 RPL10AP62906 217 aaKnown RBP13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 HYAL1Q12794 435 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 GPR17Q13304 367 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 CAMK1Q14012 370 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 EXOC3L4Q17RC7 722 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 TCP11X2Q5H9J9 407 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 WSCD1Q658N2 575 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 SMYD5Q6GMV2 418 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 TRIM59Q8IWR1 403 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 EHBP1Q8NDI1 1231 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 SLC35C1Q96A29 364 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 B3GALT6Q96L58 329 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 CLSTN3Q9BQT9 956 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 NIF3L1Q9GZT8 377 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 NDST4Q9H3R1 872 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 UBE2ZQ9H832 354 aaPredicted RBP13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 AFF4Q9UHB7 1163 aaKnown RBP13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 KIAA1257Q9ULG3 409 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 POLIQ9UNA4 740 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 HCFC2Q9Y5Z7 792 aa13.42□□□□□ -0.26
CLNS1A-201ENST00000263309 TDRD15B5MCY1 1934 aaKnown RBP13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 CHD9Q3L8U1 2897 aa13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 GTPBP10A4D1E9 387 aaKnown RBP13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 F8W810 466 aa13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 MEFVO15553 781 aaPredicted RBP13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 TGM5O43548 720 aa13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 ASS1P00966 412 aaKnown RBP13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 KCNA5P22460 613 aa13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 NOP14P78316 857 aaKnown RBP13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 PPP3CAQ08209 521 aa13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 MRPL58Q14197 206 aaKnown RBP13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 SLC39A12Q504Y0 691 aa13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 CYP4A22Q5TCH4 519 aa13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 ANKRD54Q6NXT1 300 aa13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 PDCL2Q8N4E4 241 aa13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 LEMD2Q8NC56 503 aa13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 TAS1R2Q8TE23 839 aa13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 JAKMIP2Q96AA8 810 aa13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 BORCS6Q96GS4 357 aa13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 GCNAQ96QF7 691 aa13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 MED10Q9BTT4 135 aa13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 NT5C1AQ9BXI3 368 aa13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 MAN1C1Q9NR34 630 aa13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 FANCLQ9NW38 375 aa13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 SIX4Q9UIU6 781 aa13.41□□□□□ -0.26
CLNS1A-201ENST00000263309 DAAM1Q9Y4D1 1078 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms