RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ORC4O43929 436 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 NCF1P14598 390 aaPredicted RBP12.6□□□□□ -0.39
SMG6-201ENST00000263073 PTK2BQ14289 1009 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 TRIM16LQ309B1 348 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 SUPT20HL1Q3ZLR7 823 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 BTBD8Q5XKL5 378 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 HNRNPLLQ8WVV9 542 aaKnown RBP12.6□□□□□ -0.39
SMG6-201ENST00000263073 L2HGDHQ9H9P8 463 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 CD274Q9NZQ7 290 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 APPL1Q9UKG1 709 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 SNX13Q9Y5W8 968 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 TMEM94Q12767 1356 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 TMCC1O94876 653 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 PRKCBP05771 671 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 GRIK1P39086 918 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 AMHR2Q16671 573 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 ACBD5Q5T8D3 534 aaPredicted RBP12.59□□□□□ -0.39
SMG6-201ENST00000263073 GPAT2Q6NUI2 795 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 ZNF513Q8N8E2 541 aaPredicted RBP12.59□□□□□ -0.39
SMG6-201ENST00000263073 PTPRHQ9HD43 1115 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 DDX18Q9NVP1 670 aaKnown RBP12.59□□□□□ -0.39
SMG6-201ENST00000263073 UVRAGQ9P2Y5 699 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 PNMA8BQ9ULN7 279 aaPredicted RBP12.59□□□□□ -0.39
SMG6-201ENST00000263073 SPDYE5A6NIY4 337 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 SERPINB1P30740 379 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 SPDYE7PQ495Y7 208 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 DENND5BQ6ZUT9 1274 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 UTS2BQ765I0 119 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 MICU2Q8IYU8 434 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 EFHBQ8N7U6 833 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 APOL5Q9BWW9 433 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 TEX12Q9BXU0 123 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 LRRC7Q96NW7 1537 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 FAM95CA0A1B0GW59 222 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 FAM153BP0C7A2 387 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 FAM153CQ494X1 144 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 MTHFD1LQ6UB35 978 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 FLCNQ8NFG4 579 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 FAM153AQ9UHL3 310 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 L1RE1Q9UN81 338 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 BGNP21810 368 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 CEP78Q5JTW2 689 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 C12orf60Q5U649 245 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 C11orf63Q6NUN7 778 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 ENOSF1Q7L5Y1 443 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 LAMC1P11047 1609 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 C3orf70A6NLC5 250 aaPredicted RBP12.59□□□□□ -0.39
SMG6-201ENST00000263073 PRR23D1E9PI22 279 aaPredicted RBP12.59□□□□□ -0.39
SMG6-201ENST00000263073 NBNO60934 754 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 MYO1DO94832 1006 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 TMEM253P0C7T8 217 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 PRR23D2P0DMB1 279 aaPredicted RBP12.59□□□□□ -0.39
SMG6-201ENST00000263073 PYGMP11217 842 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 ATP1A4Q13733 1029 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 SLC9A5Q14940 896 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 OASLQ15646 514 aaKnown RBP12.59□□□□□ -0.39
SMG6-201ENST00000263073 AARS2Q5JTZ9 985 aaKnown RBP12.59□□□□□ -0.39
SMG6-201ENST00000263073 HORMAD1Q86X24 394 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 FBXO36Q8NEA4 188 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 ROPN1BQ9BZX4 212 aaPredicted RBP12.59□□□□□ -0.39
SMG6-201ENST00000263073 KLHL25Q9H0H3 589 aa12.59□□□□□ -0.39
SMG6-201ENST00000263073 ROPN1Q9HAT0 212 aaPredicted RBP12.59□□□□□ -0.39
SMG6-201ENST00000263073 E9PBE3 544 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 EEF2KO00418 725 aaKnown RBP12.58□□□□□ -0.4
SMG6-201ENST00000263073 SLC37A4O43826 429 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 KLHL41O60662 606 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 YY1P25490 414 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 RECQLP46063 649 aaPredicted RBP12.58□□□□□ -0.4
SMG6-201ENST00000263073 EPHA7Q15375 998 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 NSUN4Q96CB9 384 aaKnown RBP12.58□□□□□ -0.4
SMG6-201ENST00000263073 ABHD8Q96I13 439 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 TMEM120AQ9BXJ8 343 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 PCDHGB4Q9UN71 923 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 SLC8A2Q9UPR5 921 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 TET3O43151 1660 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 RIMBP3CA6NJZ7 1639 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 RIMBP3BA6NNM3 1639 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 RIMBP3Q9UFD9 1639 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 A0A0U1RQJ8 604 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 RGS5O15539 181 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 MMP10P09238 476 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 KCTD21Q4G0X4 260 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 PATL1Q86TB9 770 aaKnown RBP12.58□□□□□ -0.4
SMG6-201ENST00000263073 C1orf131Q8NDD1 294 aaKnown RBP12.58□□□□□ -0.4
SMG6-201ENST00000263073 GID8Q9NWU2 228 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 A0A1W2PQJ5 194 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 MT-CO1P00395 513 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 HLA-DRAP01903 254 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 SFNP31947 248 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 PDIA5Q14554 519 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 POTEAQ6S8J7 498 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 SCUBE1Q8IWY4 988 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 KAT2BQ92831 832 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 ZNF669Q96BR6 464 aaPredicted RBP12.58□□□□□ -0.4
SMG6-201ENST00000263073 CYP4F12Q9HCS2 524 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 PTPN7P35236 360 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 AQP5P55064 265 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 TAP1Q03518 808 aa12.58□□□□□ -0.4
SMG6-201ENST00000263073 TCHHL1Q5QJ38 904 aaPredicted RBP12.58□□□□□ -0.4
SMG6-201ENST00000263073 GLMNQ92990 594 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms