RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 NAP1L4Q99733 375 aaKnown RBP13.72□□□□□ -0.21
SNX1-201ENST00000261889 CCDC134Q9H6E4 229 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 NR2E3Q9Y5X4 410 aa13.72□□□□□ -0.21
SNX1-201ENST00000261889 PLIN4Q96Q06 1357 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 E5RJQ4 531 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 CAPN9O14815 690 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 TBX3O15119 743 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 SORBS2O94875 1100 aaKnown RBP13.71□□□□□ -0.21
SNX1-201ENST00000261889 CD48P09326 243 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 AMPD1P23109 780 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 RIPK1Q13546 671 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 PEX6Q13608 980 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 PPP2R5EQ16537 467 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 CLEC16AQ2KHT3 1053 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 FAM111AQ96PZ2 611 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 TTC1Q99614 292 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 TUFT1Q9NNX1 390 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 WHRNQ9P202 907 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 NYAP2Q9P242 653 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 FAM237BA0A1B0GVD1 139 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 ALADP13716 330 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 BGNP21810 368 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 CALB2P22676 271 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 BLMHQ13867 455 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 CYP1B1Q16678 543 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 RAB6CQ53S08 254 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 FNBP1LQ5T0N5 605 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 ZCCHC23Q6ZST2 131 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 STK32AQ8WU08 396 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 ZNF75CPQ92670 426 aaPredicted RBP13.71□□□□□ -0.21
SNX1-201ENST00000261889 TMEM143Q96AN5 459 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 TAAR1Q96RJ0 339 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 COA1Q9GZY4 146 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 RAB6CQ9H0N0 254 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.71□□□□□ -0.21
SNX1-201ENST00000261889 PIM2Q9P1W9 311 aa13.71□□□□□ -0.21
SNX1-201ENST00000261889 CIITAP33076 1130 aa13.71□□□□□ -0.22
SNX1-201ENST00000261889 CETN2P41208 172 aa13.71□□□□□ -0.22
SNX1-201ENST00000261889 BASP1P80723 227 aaKnown RBP13.71□□□□□ -0.22
SNX1-201ENST00000261889 NLRX1Q86UT6 975 aa13.71□□□□□ -0.22
SNX1-201ENST00000261889 CCDC17Q96LX7 622 aa13.71□□□□□ -0.22
SNX1-201ENST00000261889 CADM1Q9BY67 442 aaKnown RBP13.71□□□□□ -0.22
SNX1-201ENST00000261889 SLC13A1Q9BZW2 595 aa13.71□□□□□ -0.22
SNX1-201ENST00000261889 KANSL3Q9P2N6 904 aa13.71□□□□□ -0.22
SNX1-201ENST00000261889 CYB561D2O14569 222 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 GBP1P32455 592 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 SLC8A3P57103 927 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 NLRP11P59045 1033 aaKnown RBP13.7□□□□□ -0.22
SNX1-201ENST00000261889 SATB1Q01826 763 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 NR1H3Q13133 447 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 BMPR2Q13873 1038 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 PTK6Q13882 451 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 ACSBG2Q5FVE4 666 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 CDCA2Q69YH5 1023 aaPredicted RBP13.7□□□□□ -0.22
SNX1-201ENST00000261889 RINLQ6ZS11 566 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 ANKRD35Q8N283 1001 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 DNAJC9Q8WXX5 260 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 CCDC77Q9BR77 488 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 ROPN1BQ9BZX4 212 aaPredicted RBP13.7□□□□□ -0.22
SNX1-201ENST00000261889 ROPN1Q9HAT0 212 aaPredicted RBP13.7□□□□□ -0.22
SNX1-201ENST00000261889 KMT5AQ9NQR1 393 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 CYP39A1Q9NYL5 469 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 PPP1R12AO14974 1030 aaPredicted RBP13.7□□□□□ -0.22
SNX1-201ENST00000261889 MAPK13O15264 365 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 ENO1P06733 434 aaKnown RBP13.7□□□□□ -0.22
SNX1-201ENST00000261889 HSPA6P17066 643 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 BRD2P25440 801 aaKnown RBP13.7□□□□□ -0.22
SNX1-201ENST00000261889 OGDHQ02218 1023 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 PPP2R5CQ13362 524 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 THOC5Q13769 683 aaKnown RBP13.7□□□□□ -0.22
SNX1-201ENST00000261889 CTAGE3PQ8IX95 158 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 VPS52Q8N1B4 723 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 WNK4Q96J92 1243 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 PGLYRP2Q96PD5 576 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 TXLNGQ9NUQ3 528 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 SPATS2LQ9NUQ6 558 aaKnown RBP13.7□□□□□ -0.22
SNX1-201ENST00000261889 C2CD2Q9Y426 696 aa13.7□□□□□ -0.22
SNX1-201ENST00000261889 CSDE1O75534 798 aaKnown RBP13.69□□□□□ -0.22
SNX1-201ENST00000261889 ITGBL1O95965 494 aaPredicted RBP13.69□□□□□ -0.22
SNX1-201ENST00000261889 CCNE2O96020 404 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 WEE2P0C1S8 567 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 PSMC5P62195 406 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 FKBP1AP62942 108 aaKnown RBP13.69□□□□□ -0.22
SNX1-201ENST00000261889 ZNF568Q3ZCX4 644 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 C3orf62Q6ZUJ4 267 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 ZBTB33Q86T24 672 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 KBTBD2Q8IY47 623 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 TEKT4Q8WW24 435 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 MCUR1Q96AQ8 359 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 CCDC124Q96CT7 223 aaKnown RBP13.69□□□□□ -0.22
SNX1-201ENST00000261889 CEP170P1Q96L14 293 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 ACAP3Q96P50 834 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 PPP1R16BQ96T49 567 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 C1orf112Q9NSG2 853 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 TTLL13PA6NNM8 815 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 H3BRJ5 948 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 ATXN3P54252 364 aaPredicted RBP13.69□□□□□ -0.22
SNX1-201ENST00000261889 GPX6P59796 221 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 MRPS9P82933 396 aaKnown RBP13.69□□□□□ -0.22
SNX1-201ENST00000261889 NFX1Q12986 1120 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms