RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 SELENONQ9NZV5 590 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 NAGPAQ9UK23 515 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 C19orf81C9J6K1 198 aa12.65□□□□□ -0.39
COL8A1-201ENST00000261037 CD4P01730 458 aa12.65□□□□□ -0.39
COL8A1-201ENST00000261037 ITIH2P19823 946 aa12.65□□□□□ -0.39
COL8A1-201ENST00000261037 KLRK1P26718 216 aa12.65□□□□□ -0.39
COL8A1-201ENST00000261037 RFC5P40937 340 aa12.65□□□□□ -0.39
COL8A1-201ENST00000261037 PLA2G4AP47712 749 aa12.65□□□□□ -0.39
COL8A1-201ENST00000261037 RABL6Q3YEC7 729 aaPredicted RBP12.65□□□□□ -0.39
COL8A1-201ENST00000261037 SBK1Q52WX2 424 aa12.65□□□□□ -0.39
COL8A1-201ENST00000261037 BTNL9Q6UXG8 535 aa12.65□□□□□ -0.39
COL8A1-201ENST00000261037 RAD9BQ6WBX8 426 aa12.65□□□□□ -0.39
COL8A1-201ENST00000261037 C3orf62Q6ZUJ4 267 aa12.65□□□□□ -0.39
COL8A1-201ENST00000261037 JAMLQ86YT9 394 aa12.65□□□□□ -0.39
COL8A1-201ENST00000261037 SHCBP1Q8NEM2 672 aa12.65□□□□□ -0.39
COL8A1-201ENST00000261037 PCDHB8Q9UN66 801 aa12.65□□□□□ -0.39
COL8A1-201ENST00000261037 CFAP73A6NFT4 308 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 BTKQ06187 659 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 CNGA3Q16281 694 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 TJAP1Q5JTD0 557 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 FAXCQ5TGI0 409 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 CLEC4FQ8N1N0 589 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 BTN2A2Q8WVV5 523 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 ATG4CQ96DT6 458 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 EHD2Q9NZN4 543 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 ADAMTS13Q76LX8 1427 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 CCL15-CCL14A0A0B4J2E2 113 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 FKBP9O95302 570 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 GRIN1Q05586 938 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 STILQ15468 1287 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 CCL15Q16663 113 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 TSGA10IPQ3SY00 556 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 TTC39BQ5VTQ0 682 aaPredicted RBP12.64□□□□□ -0.39
COL8A1-201ENST00000261037 LVRNQ6Q4G3 990 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 NUDT18Q6ZVK8 323 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 FKBP9P1Q75LS8 142 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 C1orf131Q8NDD1 294 aaKnown RBP12.64□□□□□ -0.39
COL8A1-201ENST00000261037 MRPL1Q9BYD6 325 aaKnown RBP12.64□□□□□ -0.39
COL8A1-201ENST00000261037 TMEM8AQ9HCN3 771 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 KCNH7Q9NS40 1196 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 ABI2Q9NYB9 513 aaPredicted RBP12.64□□□□□ -0.39
COL8A1-201ENST00000261037 WDR35Q9P2L0 1181 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 TAF6LQ9Y6J9 622 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 RASGRP2Q7LDG7 609 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 ZNF34Q8IZ26 560 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 SMAD5Q99717 465 aaKnown RBP12.64□□□□□ -0.39
COL8A1-201ENST00000261037 CST8O60676 142 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 HSPA1AP0DMV8 641 aaKnown RBP12.64□□□□□ -0.39
COL8A1-201ENST00000261037 HSPA1BP0DMV9 641 aaKnown RBP12.64□□□□□ -0.39
COL8A1-201ENST00000261037 TBC1D19Q8N5T2 526 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 KIAA1210Q9ULL0 1709 aa12.64□□□□□ -0.39
COL8A1-201ENST00000261037 MAP3K6O95382 1288 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 MZF1P28698 734 aaPredicted RBP12.63□□□□□ -0.39
COL8A1-201ENST00000261037 MAGEA4P43358 317 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 CARSP49589 748 aaKnown RBP12.63□□□□□ -0.39
COL8A1-201ENST00000261037 MROH9Q5TGP6 573 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 DENND5BQ6ZUT9 1274 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 KIF2BQ8N4N8 673 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 STKLD1Q8NE28 680 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 HPDLQ96IR7 371 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 RUSC1Q9BVN2 902 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 ZNF229Q9UJW7 825 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 SMG5Q9UPR3 1016 aaKnown RBP12.63□□□□□ -0.39
COL8A1-201ENST00000261037 LZTS1Q9Y250 596 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 ITIH6Q6UXX5 1313 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 PREX1Q8TCU6 1659 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 SLC37A4O43826 429 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 DDHD2O94830 711 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 RAP1GAPP47736 663 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 ABCE1P61221 599 aaKnown RBP12.63□□□□□ -0.39
COL8A1-201ENST00000261037 SLC9A5Q14940 896 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 C2CD6Q53TS8 623 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 ZKSCAN4Q969J2 545 aaPredicted RBP12.63□□□□□ -0.39
COL8A1-201ENST00000261037 IL17RAQ96F46 866 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 OSBPL8Q9BZF1 889 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 GPR63Q9BZJ6 419 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 CATSPERBQ9H7T0 1116 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 PDS5AQ29RF7 1337 aaKnown RBP12.63□□□□□ -0.39
COL8A1-201ENST00000261037 PRR23AA6NEV1 266 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 CHRM3P20309 590 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 CPA2P48052 419 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 CENPAP49450 140 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 CHSY1Q86X52 802 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 KIF2CQ99661 725 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 RANBP17Q9H2T7 1088 aaKnown RBP12.63□□□□□ -0.39
COL8A1-201ENST00000261037 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.63□□□□□ -0.39
COL8A1-201ENST00000261037 RHOBTB1O94844 696 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 CYP2C19P33261 490 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 RAP1GDS1P52306 607 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 RPS6P62753 249 aaKnown RBP12.63□□□□□ -0.39
COL8A1-201ENST00000261037 CHI3L2Q15782 390 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 KYNUQ16719 465 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 DGKDQ16760 1214 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 THTPAQ9BU02 230 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 SLC39A10Q9ULF5 831 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 PRG3Q9Y2Y8 225 aaPredicted RBP12.63□□□□□ -0.39
COL8A1-201ENST00000261037 ADCY3O60266 1144 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 CELF2O95319 508 aaKnown RBP12.63□□□□□ -0.39
COL8A1-201ENST00000261037 FBXW10Q5XX13 1052 aa12.63□□□□□ -0.39
COL8A1-201ENST00000261037 SGF29Q96ES7 293 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms