RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 CCDC77Q9BR77 488 aa11.44□□□□□ -0.58
CHRNA1-201ENST00000261007 DDX23Q9BUQ8 820 aaKnown RBP11.44□□□□□ -0.58
CHRNA1-201ENST00000261007 ZNF302Q9NR11 478 aa11.44□□□□□ -0.58
CHRNA1-201ENST00000261007 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.44□□□□□ -0.58
CHRNA1-201ENST00000261007 WDR35Q9P2L0 1181 aa11.44□□□□□ -0.58
CHRNA1-201ENST00000261007 MAFBQ9Y5Q3 323 aaPredicted RBP11.44□□□□□ -0.58
CHRNA1-201ENST00000261007 TMEM150BA6NC51 233 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 HNRNPDLO14979 420 aaKnown RBP11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 LDHAP00338 332 aaKnown RBP11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 PIGRP01833 764 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 OATP04181 439 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 ADRB2P07550 413 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 ADSSP30520 456 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 SSR1P43307 286 aaKnown RBP11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 NAMPTP43490 491 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 HIRAP54198 1017 aaPredicted RBP11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 CYP24A1Q07973 514 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 VGLL4Q14135 290 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 STAT4Q14765 748 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 PRAMEF18Q5VWM3 479 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 FAM160B1Q5W0V3 765 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 RELL1Q8IUW5 271 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 SULF1Q8IWU6 871 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 EXOC8Q8IYI6 725 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 SHC3Q92529 594 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 DHX38Q92620 1227 aaKnown RBP11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 SYT15Q9BQS2 421 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 NIFKQ9BYG3 293 aaKnown RBP11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 POLR3FQ9H1D9 316 aaPredicted RBP11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 UBN1Q9NPG3 1134 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 TAS2R14Q9NYV8 317 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 STOML1Q9UBI4 398 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 MYH9P35579 1960 aaKnown RBP11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 PAPPA2Q9BXP8 1791 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 TISP43B9A030 160 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 CXCL11O14625 94 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 TP73O15350 636 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 EXTL3O43909 919 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 ACSL3O95573 720 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 SLC25A27O95847 323 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 GH1P01241 217 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 PYGMP11217 842 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 COMTP21964 271 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 EDNRBP24530 442 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 FOXN2P32314 431 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 PTDSS1P48651 473 aaKnown RBP11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 MOGSQ13724 837 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 EMC2Q15006 297 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 ZRSR2Q15696 482 aaKnown RBP11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 TMEM154Q6P9G4 183 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 CEP128Q6ZU80 1094 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 LONP2Q86WA8 852 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 CBWD2Q8IUF1 395 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 ARHGEF19Q8IW93 802 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 MAIP1Q8WWC4 291 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 SLC7A3Q8WY07 619 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 BSNDQ8WZ55 320 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 FAM136AQ96C01 138 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 SLC7A6OSQ96CW6 309 aaPredicted RBP11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 ERP27Q96DN0 273 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 BICD1Q96G01 975 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 SNF8Q96H20 258 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 FAM167AQ96KS9 214 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 PLVAPQ9BX97 442 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 TBC1D10AQ9BXI6 508 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 XPNPEP1Q9NQW7 623 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 SAR1AQ9NR31 198 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 NRBP2Q9NSY0 501 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 SEPT11Q9NVA2 429 aaKnown RBP11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 LNPEPQ9UIQ6 1025 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 ZMYND8Q9ULU4 1186 aaPredicted RBP11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 CHKBQ9Y259 395 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 STYXL1Q9Y6J8 313 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 PTPRFP10586 1907 aa11.43□□□□□ -0.58
CHRNA1-201ENST00000261007 LCTP09848 1927 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 IGKV6D-21A0A0A0MT36 114 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 FAM47DPA6NHR8 397 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 SPDYE5A6NIY4 337 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 FSCN2O14926 492 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 GAS2O43903 313 aaKnown RBP11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 LRRN2O75325 713 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 FTLP02792 175 aaPredicted RBP11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 SP100P23497 879 aaPredicted RBP11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 PTPN4P29074 926 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 MARCKSL1P49006 195 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 LIG4P49917 911 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 GCNT1Q02742 428 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 PTK6Q13882 451 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 BBOF1Q8ND07 529 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 PLEKHO2Q8TD55 490 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 GRK7Q8WTQ7 553 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 ZNF333Q96JL9 665 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 SH2D3AQ9BRG2 576 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 PORCNQ9H237 461 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 DHX33Q9H6R0 707 aaKnown RBP11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 RAB20Q9NX57 234 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 EURLQ9NYK6 297 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 NAALADL1Q9UQQ1 740 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 LRCH1Q9Y2L9 728 aa11.42□□□□□ -0.58
CHRNA1-201ENST00000261007 GOLGA8IPA6NC78 632 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms