RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 ZBTB8OSQ8IWT0 167 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 CYFIP2Q96F07 1278 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 TRIM11Q96F44 468 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 JPH2Q9BR39 696 aaPredicted RBP18.8■□□□□ 0.6
SSB-201ENST00000260956 MINDY3Q9H8M7 445 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 ATP11BQ9Y2G3 1177 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 SCN10AQ9Y5Y9 1956 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 ARVCFO00192 962 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 HAS3O00219 553 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 B4GALT5O43286 388 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 SRGAP2CP0DJJ0 459 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 DRG2P55039 364 aaKnown RBP18.8■□□□□ 0.6
SSB-201ENST00000260956 KCTD19Q17RG1 926 aaPredicted RBP18.8■□□□□ 0.6
SSB-201ENST00000260956 PLEKHA7Q6IQ23 1121 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 ZDHHC24Q6UX98 284 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 JAMLQ86YT9 394 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 CPA5Q8WXQ8 436 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 ZBTB10Q96DT7 871 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 HTATIP2Q9BUP3 242 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 MTMR12Q9C0I1 747 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 RNPEPQ9H4A4 650 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 FAM114A2Q9NRY5 505 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 TCRBV5S1A1TA0A578 114 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 B4GALT4O60513 344 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 PQBP1O60828 265 aaKnown RBP18.79■□□□□ 0.6
SSB-201ENST00000260956 HSF2BPO75031 334 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 CABYRO75952 493 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 IQCF3P0C7M6 154 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 HARSP12081 509 aaKnown RBP18.79■□□□□ 0.6
SSB-201ENST00000260956 CLCN3P51790 818 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 POU5F1BQ06416 359 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 FAM187BQ17R55 369 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 EMC10Q5UCC4 262 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 TMEM270Q6UE05 265 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 LRIG3Q6UXM1 1119 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 TMC3Q7Z5M5 1100 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 ZBTB33Q86T24 672 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 C7orf61Q8IZ16 206 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 VCPIP1Q96JH7 1222 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 ERP44Q9BS26 406 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 TRPV6Q9H1D0 765 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 CDT1Q9H211 546 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 IFT122Q9HBG6 1241 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 GRHL1Q9NZI5 618 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 PCDHB4Q9Y5E5 795 aa18.79■□□□□ 0.6
SSB-201ENST00000260956 GOLGA6L10A0A0M3HER8 536 aa18.78■□□□□ 0.6
SSB-201ENST00000260956 FSCN2O14926 492 aa18.78■□□□□ 0.6
SSB-201ENST00000260956 OPA1O60313 960 aa18.78■□□□□ 0.6
SSB-201ENST00000260956 KPNA6O60684 536 aa18.78■□□□□ 0.6
SSB-201ENST00000260956 GNA15P30679 374 aa18.78■□□□□ 0.6
SSB-201ENST00000260956 CHRNA3P32297 505 aa18.78■□□□□ 0.6
SSB-201ENST00000260956 HSD17B3P37058 310 aa18.78■□□□□ 0.6
SSB-201ENST00000260956 LMAN1P49257 510 aa18.78■□□□□ 0.6
SSB-201ENST00000260956 DR1Q01658 176 aa18.78■□□□□ 0.6
SSB-201ENST00000260956 FAAP100Q0VG06 881 aa18.78■□□□□ 0.6
SSB-201ENST00000260956 CFAP58Q5T655 872 aa18.78■□□□□ 0.6
SSB-201ENST00000260956 ATF7IP2Q5U623 682 aa18.78■□□□□ 0.6
SSB-201ENST00000260956 ANKRD33Q7Z3H0 272 aa18.78■□□□□ 0.6
SSB-201ENST00000260956 CXorf38Q8TB03 319 aa18.78■□□□□ 0.6
SSB-201ENST00000260956 DDX27Q96GQ7 796 aaKnown RBP18.78■□□□□ 0.6
SSB-201ENST00000260956 HERPUD2Q9BSE4 406 aa18.78■□□□□ 0.6
SSB-201ENST00000260956 ANAPC7Q9UJX3 599 aa18.78■□□□□ 0.6
SSB-201ENST00000260956 TNFSF13BQ9Y275 285 aa18.78■□□□□ 0.6
SSB-201ENST00000260956 H3BRB1 525 aa18.77■□□□□ 0.6
SSB-201ENST00000260956 SPOPO43791 374 aa18.77■□□□□ 0.6
SSB-201ENST00000260956 PROSCO94903 275 aa18.77■□□□□ 0.6
SSB-201ENST00000260956 RARAP10276 462 aa18.77■□□□□ 0.6
SSB-201ENST00000260956 ITGB8P26012 769 aa18.77■□□□□ 0.6
SSB-201ENST00000260956 MYL6P60660 151 aa18.77■□□□□ 0.6
SSB-201ENST00000260956 C1QBPQ07021 282 aaKnown RBP18.77■□□□□ 0.6
SSB-201ENST00000260956 PPFIA1Q13136 1202 aa18.77■□□□□ 0.6
SSB-201ENST00000260956 SURF1Q15526 300 aa18.77■□□□□ 0.6
SSB-201ENST00000260956 ADAT2Q7Z6V5 191 aaKnown RBP18.77■□□□□ 0.6
SSB-201ENST00000260956 RHPN2Q8IUC4 686 aa18.77■□□□□ 0.6
SSB-201ENST00000260956 FAM126BQ8IXS8 530 aa18.77■□□□□ 0.6
SSB-201ENST00000260956 CEP120Q8N960 986 aa18.77■□□□□ 0.6
SSB-201ENST00000260956 SLCO2A1Q92959 643 aa18.77■□□□□ 0.6
SSB-201ENST00000260956 C18orf8Q96DM3 657 aa18.77■□□□□ 0.6
SSB-201ENST00000260956 NIF3L1Q9GZT8 377 aa18.77■□□□□ 0.6
SSB-201ENST00000260956 RAB17Q9H0T7 212 aa18.77■□□□□ 0.6
SSB-201ENST00000260956 TUT1Q9H6E5 874 aaKnown RBP18.77■□□□□ 0.6
SSB-201ENST00000260956 TRMT13Q9NUP7 481 aaKnown RBP18.77■□□□□ 0.6
SSB-201ENST00000260956 GOLGA6CA6NDK9 693 aa18.77■□□□□ 0.59
SSB-201ENST00000260956 ASAP2O43150 1006 aa18.77■□□□□ 0.59
SSB-201ENST00000260956 PPFIA2O75334 1257 aa18.77■□□□□ 0.59
SSB-201ENST00000260956 GOLGA6DP0CG33 693 aa18.77■□□□□ 0.59
SSB-201ENST00000260956 SYN1P17600 705 aa18.77■□□□□ 0.59
SSB-201ENST00000260956 CDH5P33151 784 aaPredicted RBP18.77■□□□□ 0.59
SSB-201ENST00000260956 ASPAP45381 313 aa18.77■□□□□ 0.59
SSB-201ENST00000260956 NSFP46459 744 aaKnown RBP18.77■□□□□ 0.59
SSB-201ENST00000260956 PSEN2P49810 448 aa18.77■□□□□ 0.59
SSB-201ENST00000260956 RWDD2BP57060 319 aa18.77■□□□□ 0.59
SSB-201ENST00000260956 SKOR1P84550 965 aa18.77■□□□□ 0.59
SSB-201ENST00000260956 TFDP1Q14186 410 aa18.77■□□□□ 0.59
SSB-201ENST00000260956 HLTFQ14527 1009 aaKnown RBP eCLIP18.77■□□□□ 0.59
SSB-201ENST00000260956 MFSD10Q14728 455 aa18.77■□□□□ 0.59
SSB-201ENST00000260956 ZNF484Q5JVG2 852 aa18.77■□□□□ 0.59
SSB-201ENST00000260956 SEL1L2Q5TEA6 688 aa18.77■□□□□ 0.59
SSB-201ENST00000260956 EFCAB12Q6NXP0 572 aa18.77■□□□□ 0.59
SSB-201ENST00000260956 EPB41L4BQ9H329 900 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms