RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 RWDD3Q9Y3V2 267 aa18.66■□□□□ 0.58
SRSF1-201ENST00000258962 C2CD2Q9Y426 696 aa18.66■□□□□ 0.58
SRSF1-201ENST00000258962 HES2Q9Y543 173 aa18.66■□□□□ 0.58
SRSF1-201ENST00000258962 TBKBP1A7MCY6 615 aa18.65■□□□□ 0.58
SRSF1-201ENST00000258962 BTNL10A8MVZ5 291 aa18.65■□□□□ 0.58
SRSF1-201ENST00000258962 CALCAP01258 141 aa18.65■□□□□ 0.58
SRSF1-201ENST00000258962 FGFR1P11362 822 aa18.65■□□□□ 0.58
SRSF1-201ENST00000258962 IGFBP4P22692 258 aa18.65■□□□□ 0.58
SRSF1-201ENST00000258962 FMO1Q01740 532 aa18.65■□□□□ 0.58
SRSF1-201ENST00000258962 ZNF699Q32M78 642 aa18.65■□□□□ 0.58
SRSF1-201ENST00000258962 TAF3Q5VWG9 929 aa18.65■□□□□ 0.58
SRSF1-201ENST00000258962 CD302Q8IX05 232 aa18.65■□□□□ 0.58
SRSF1-201ENST00000258962 NAPGQ99747 312 aaPredicted RBP18.65■□□□□ 0.58
SRSF1-201ENST00000258962 C17orf80Q9BSJ5 609 aa18.65■□□□□ 0.58
SRSF1-201ENST00000258962 NIF3L1Q9GZT8 377 aa18.65■□□□□ 0.58
SRSF1-201ENST00000258962 PLEKHA5Q9HAU0 1116 aa18.65■□□□□ 0.58
SRSF1-201ENST00000258962 RC3H2Q9HBD1 1191 aaKnown RBP18.65■□□□□ 0.58
SRSF1-201ENST00000258962 INTUQ9ULD6 942 aa18.65■□□□□ 0.58
SRSF1-201ENST00000258962 CTAGE9A4FU28 777 aa18.64■□□□□ 0.58
SRSF1-201ENST00000258962 ITGB3P05106 788 aa18.64■□□□□ 0.58
SRSF1-201ENST00000258962 MMEP08473 750 aa18.64■□□□□ 0.58
SRSF1-201ENST00000258962 H2AFZP0C0S5 128 aa18.64■□□□□ 0.58
SRSF1-201ENST00000258962 GATMP50440 423 aa18.64■□□□□ 0.58
SRSF1-201ENST00000258962 PDE6CP51160 858 aa18.64■□□□□ 0.58
SRSF1-201ENST00000258962 GUCY2FP51841 1108 aa18.64■□□□□ 0.58
SRSF1-201ENST00000258962 CDR2Q01850 454 aa18.64■□□□□ 0.58
SRSF1-201ENST00000258962 H2AFVQ71UI9 128 aa18.64■□□□□ 0.58
SRSF1-201ENST00000258962 SPRED2Q7Z698 418 aa18.64■□□□□ 0.58
SRSF1-201ENST00000258962 NT5DC4Q86YG4 428 aa18.64■□□□□ 0.58
SRSF1-201ENST00000258962 FBXO22Q8NEZ5 403 aa18.64■□□□□ 0.58
SRSF1-201ENST00000258962 PGBD4Q96DM1 585 aa18.64■□□□□ 0.58
SRSF1-201ENST00000258962 SEPT11Q9NVA2 429 aaKnown RBP18.64■□□□□ 0.58
SRSF1-201ENST00000258962 PCDHB2Q9Y5E7 798 aa18.64■□□□□ 0.58
SRSF1-201ENST00000258962 TMCO5BA8MYB1 307 aa18.64■□□□□ 0.57
SRSF1-201ENST00000258962 RFXAPO00287 272 aa18.64■□□□□ 0.57
SRSF1-201ENST00000258962 BUB1O43683 1085 aa18.64■□□□□ 0.57
SRSF1-201ENST00000258962 ZNF623O75123 536 aa18.64■□□□□ 0.57
SRSF1-201ENST00000258962 RECQL4O94761 1208 aa18.64■□□□□ 0.57
SRSF1-201ENST00000258962 CLSTN1O94985 981 aa18.64■□□□□ 0.57
SRSF1-201ENST00000258962 KRT19P08727 400 aa18.64■□□□□ 0.57
SRSF1-201ENST00000258962 ASPAP45381 313 aa18.64■□□□□ 0.57
SRSF1-201ENST00000258962 GALCP54803 685 aa18.64■□□□□ 0.57
SRSF1-201ENST00000258962 SPOUT1Q5T280 376 aaKnown RBP18.64■□□□□ 0.57
SRSF1-201ENST00000258962 ALKAL1Q6UXT8 129 aa18.64■□□□□ 0.57
SRSF1-201ENST00000258962 ZNF598Q86UK7 904 aaKnown RBP18.64■□□□□ 0.57
SRSF1-201ENST00000258962 RNF10Q8N5U6 811 aaKnown RBP18.64■□□□□ 0.57
SRSF1-201ENST00000258962 TAF4BQ92750 862 aa18.64■□□□□ 0.57
SRSF1-201ENST00000258962 KIF12Q96FN5 646 aa18.64■□□□□ 0.57
SRSF1-201ENST00000258962 ZMAT2Q96NC0 199 aaKnown RBP18.64■□□□□ 0.57
SRSF1-201ENST00000258962 TRIM6Q9C030 488 aaPredicted RBP18.64■□□□□ 0.57
SRSF1-201ENST00000258962 POLIQ9UNA4 740 aa18.64■□□□□ 0.57
SRSF1-201ENST00000258962 DERAQ9Y315 318 aa18.64■□□□□ 0.57
SRSF1-201ENST00000258962 PCDHB4Q9Y5E5 795 aa18.64■□□□□ 0.57
SRSF1-201ENST00000258962 SCN1AP35498 2009 aa18.63■□□□□ 0.57
SRSF1-201ENST00000258962 UQCRHLA0A096LP55 91 aa18.63■□□□□ 0.57
SRSF1-201ENST00000258962 DYNC1I1O14576 645 aa18.63■□□□□ 0.57
SRSF1-201ENST00000258962 TACC1O75410 805 aa18.63■□□□□ 0.57
SRSF1-201ENST00000258962 UQCRHP07919 91 aa18.63■□□□□ 0.57
SRSF1-201ENST00000258962 CTNNB1P35222 781 aa18.63■□□□□ 0.57
SRSF1-201ENST00000258962 GTF2F1P35269 517 aaKnown RBP eCLIP18.63■□□□□ 0.572e-7■■■□□ 15.1
SRSF1-201ENST00000258962 BMPR1AP36894 532 aa18.63■□□□□ 0.57
SRSF1-201ENST00000258962 ZNF132P52740 706 aa18.63■□□□□ 0.57
SRSF1-201ENST00000258962 AMPD2Q01433 879 aa18.63■□□□□ 0.57
SRSF1-201ENST00000258962 ZBTB6Q15916 424 aa18.63■□□□□ 0.57
SRSF1-201ENST00000258962 RBBP8NLQ8NC74 664 aaPredicted RBP18.63■□□□□ 0.57
SRSF1-201ENST00000258962 SMG8Q8ND04 991 aaKnown RBP18.63■□□□□ 0.57
SRSF1-201ENST00000258962 TRIM58Q8NG06 486 aa18.63■□□□□ 0.57
SRSF1-201ENST00000258962 CLP1Q92989 425 aaKnown RBP18.63■□□□□ 0.57
SRSF1-201ENST00000258962 NOX5Q96PH1 765 aa18.63■□□□□ 0.57
SRSF1-201ENST00000258962 ISCUQ9H1K1 167 aa18.63■□□□□ 0.57
SRSF1-201ENST00000258962 DPP3Q9NY33 737 aa18.63■□□□□ 0.57
SRSF1-201ENST00000258962 CNTN3Q9P232 1028 aa18.63■□□□□ 0.57
SRSF1-201ENST00000258962 ITGA11Q9UKX5 1188 aa18.63■□□□□ 0.57
SRSF1-201ENST00000258962 MRFAP1Q9Y605 127 aa18.63■□□□□ 0.57
SRSF1-201ENST00000258962 MRPL42Q9Y6G3 142 aaKnown RBP18.63■□□□□ 0.57
SRSF1-201ENST00000258962 NCANO14594 1321 aa18.62■□□□□ 0.57
SRSF1-201ENST00000258962 EPOPA6NHQ4 379 aa18.62■□□□□ 0.57
SRSF1-201ENST00000258962 ATP1A1P05023 1023 aaKnown RBP18.62■□□□□ 0.57
SRSF1-201ENST00000258962 RB1P06400 928 aa18.62■□□□□ 0.57
SRSF1-201ENST00000258962 TMEM253P0C7T8 217 aa18.62■□□□□ 0.57
SRSF1-201ENST00000258962 AKAP5P24588 427 aa18.62■□□□□ 0.57
SRSF1-201ENST00000258962 POLR2BP30876 1174 aaKnown RBP18.62■□□□□ 0.57
SRSF1-201ENST00000258962 YARSP54577 528 aaKnown RBP18.62■□□□□ 0.57
SRSF1-201ENST00000258962 TMEM270Q6UE05 265 aa18.62■□□□□ 0.57
SRSF1-201ENST00000258962 GLB1LQ6UWU2 654 aa18.62■□□□□ 0.57
SRSF1-201ENST00000258962 SCARA5Q6ZMJ2 495 aa18.62■□□□□ 0.57
SRSF1-201ENST00000258962 APOL6Q9BWW8 343 aa18.62■□□□□ 0.57
SRSF1-201ENST00000258962 RNF39Q9H2S5 420 aa18.62■□□□□ 0.57
SRSF1-201ENST00000258962 VRTNQ9H8Y1 702 aa18.62■□□□□ 0.57
SRSF1-201ENST00000258962 AAASQ9NRG9 546 aa18.62■□□□□ 0.57
SRSF1-201ENST00000258962 IPPQ9Y573 584 aa18.62■□□□□ 0.57
SRSF1-201ENST00000258962 FAM170AA1A519 330 aa18.61■□□□□ 0.57
SRSF1-201ENST00000258962 ANO9A1A5B4 782 aa18.61■□□□□ 0.57
SRSF1-201ENST00000258962 ENC1O14682 589 aa18.61■□□□□ 0.57
SRSF1-201ENST00000258962 ATF7P17544 494 aaPredicted RBP18.61■□□□□ 0.57
SRSF1-201ENST00000258962 TUBB2AQ13885 445 aa18.61■□□□□ 0.57
SRSF1-201ENST00000258962 ADGRE1Q14246 886 aa18.61■□□□□ 0.57
SRSF1-201ENST00000258962 MRPL10Q7Z7H8 261 aaKnown RBP18.61■□□□□ 0.57
SRSF1-201ENST00000258962 HACE1Q8IYU2 909 aa18.61■□□□□ 0.57
SRSF1-201ENST00000258962 GDPD5Q8WTR4 605 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms