RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 PLA2G6O60733 806 aa9.63□□□□□ -0.87
CKAP2-201ENST00000258607 POMCP01189 267 aa9.63□□□□□ -0.87
CKAP2-201ENST00000258607 C4BPAP04003 597 aaKnown RBP9.63□□□□□ -0.87
CKAP2-201ENST00000258607 KRT3P12035 628 aa9.63□□□□□ -0.87
CKAP2-201ENST00000258607 ITGA8P53708 1063 aa9.63□□□□□ -0.87
CKAP2-201ENST00000258607 OGDHQ02218 1023 aa9.63□□□□□ -0.87
CKAP2-201ENST00000258607 MAP3K10Q02779 954 aa9.63□□□□□ -0.87
CKAP2-201ENST00000258607 TUBB2AQ13885 445 aa9.63□□□□□ -0.87
CKAP2-201ENST00000258607 KIF22Q14807 665 aa9.63□□□□□ -0.87
CKAP2-201ENST00000258607 FASTKD3Q14CZ7 662 aaKnown RBP9.63□□□□□ -0.87
CKAP2-201ENST00000258607 CLEC16AQ2KHT3 1053 aa9.63□□□□□ -0.87
CKAP2-201ENST00000258607 SPNS2Q8IVW8 549 aa9.63□□□□□ -0.87
CKAP2-201ENST00000258607 CTAGE3PQ8IX95 158 aa9.63□□□□□ -0.87
CKAP2-201ENST00000258607 C4orf33Q8N1A6 199 aa9.63□□□□□ -0.87
CKAP2-201ENST00000258607 KCTD6Q8NC69 237 aa9.63□□□□□ -0.87
CKAP2-201ENST00000258607 TUBB2BQ9BVA1 445 aa9.63□□□□□ -0.87
CKAP2-201ENST00000258607 IL1RAPL1Q9NZN1 696 aa9.63□□□□□ -0.87
CKAP2-201ENST00000258607 MROH7Q68CQ1 1323 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.62□□□□□ -0.87
CKAP2-201ENST00000258607 CCDC66A2RUB6 948 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 GLTPD2A6NH11 291 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 H7C0C1 242 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 LCA5LO95447 670 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 ATF2P15336 505 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 ATP5OP48047 213 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 CASC4Q6P4E1 433 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 HACE1Q8IYU2 909 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 SAMD3Q8N6K7 520 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 DNERQ8NFT8 737 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 RHOBTB2Q9BYZ6 727 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 OSBPL8Q9BZF1 889 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 KIF9Q9HAQ2 790 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 SAYSD1Q9NPB0 183 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 RASAL2Q9UJF2 1139 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.62□□□□□ -0.87
CKAP2-201ENST00000258607 E5RJQ4 531 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 MAFGO15525 162 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 CREB3O43889 395 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 CST8O60676 142 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 SAT1P21673 171 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 ARSEP51690 589 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 PTPN20Q4JDL3 420 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 SLFN12LQ6IEE8 588 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 LRRC31Q6UY01 552 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 RUFY4Q6ZNE9 571 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 ZNF354CQ86Y25 554 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 FAM71DQ8N9W8 422 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.62□□□□□ -0.87
CKAP2-201ENST00000258607 TMEM40Q8WWA1 233 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 HES6Q96HZ4 224 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 FGD4Q96M96 766 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 OSBPL7Q9BZF2 842 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 SDCBP2Q9H190 292 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 RNF14Q9UBS8 474 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 ANAPC5Q9UJX4 755 aa9.62□□□□□ -0.87
CKAP2-201ENST00000258607 GTPBP10A4D1E9 387 aaKnown RBP9.61□□□□□ -0.87
CKAP2-201ENST00000258607 SOCS7O14512 581 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 AVILO75366 819 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 MAFO75444 373 aaPredicted RBP9.61□□□□□ -0.87
CKAP2-201ENST00000258607 GH1P01241 217 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 KRT15P19012 456 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 TFE3P19532 575 aaPredicted RBP9.61□□□□□ -0.87
CKAP2-201ENST00000258607 ACTN2P35609 894 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 ARL2P36404 184 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 CDH6P55285 790 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 MAMLD1Q13495 774 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 ACVR2BQ13705 512 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 TFDP1Q14186 410 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 TMEM132DQ14C87 1099 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 MPZL3Q6UWV2 235 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 NIPA1Q7RTP0 329 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 FAM131BQ86XD5 332 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 ACAP3Q96P50 834 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 ERP44Q9BS26 406 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 NIF3L1Q9GZT8 377 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 PDGFRAP16234 1089 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 LMO2P25791 158 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 PBX3P40426 434 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 ALCAMQ13740 583 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 ZC3H12AQ5D1E8 599 aaKnown RBP9.61□□□□□ -0.87
CKAP2-201ENST00000258607 IER5Q5VY09 327 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 CCDC13Q8IYE1 715 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 ZBED8Q8IZ13 594 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 CCDC89Q8N998 374 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 GPR152Q8TDT2 470 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 L3MBTL3Q96JM7 780 aaPredicted RBP9.61□□□□□ -0.87
CKAP2-201ENST00000258607 MFSD14AQ96MC6 490 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 AGAP3Q96P47 875 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 FLRT1Q9NZU1 646 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 MTRF1LQ9UGC7 380 aaKnown RBP9.61□□□□□ -0.87
CKAP2-201ENST00000258607 FNDC3AQ9Y2H6 1198 aaKnown RBP9.61□□□□□ -0.87
CKAP2-201ENST00000258607 MAD1L1Q9Y6D9 718 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 MYADML2A6NDP7 307 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 F8W810 466 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 IGF2BP3O00425 579 aaKnown RBP eCLIP9.61□□□□□ -0.87
CKAP2-201ENST00000258607 COILP38432 576 aaPredicted RBP9.61□□□□□ -0.87
CKAP2-201ENST00000258607 ABCG1P45844 678 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 IRAK1P51617 712 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 PMS2P54278 862 aa9.61□□□□□ -0.87
CKAP2-201ENST00000258607 CRADDP78560 199 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms