RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 SCTRP47872 440 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 CCT3P49368 545 aaKnown RBP8.55□□□□□ -1.04
DSG3-201ENST00000257189 BCAR1P56945 870 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 FBXW4P57775 412 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 ZNF200P98182 395 aaPredicted RBP8.55□□□□□ -1.04
DSG3-201ENST00000257189 CENPCQ03188 943 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 ZFP1Q6P2D0 407 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 RASGRP2Q7LDG7 609 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 PRPF39Q86UA1 669 aaKnown RBP8.55□□□□□ -1.04
DSG3-201ENST00000257189 MAGEB18Q96M61 343 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 PDCD10Q9BUL8 212 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 CD248Q9HCU0 757 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 PCDHA1Q9Y5I3 950 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 DENND3A2RUS2 1198 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 PLCG1P19174 1290 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 SDC4P31431 198 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 ROR2Q01974 943 aaKnown RBP8.55□□□□□ -1.04
DSG3-201ENST00000257189 PUDPQ08623 228 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 COX10Q12887 443 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 TIMM50Q3ZCQ8 353 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 ZNF667Q5HYK9 610 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 FAM83BQ5T0W9 1011 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 CCDC36Q8IYA8 594 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 ELOA2Q8IYF1 753 aaPredicted RBP8.55□□□□□ -1.04
DSG3-201ENST00000257189 RNPC3Q96LT9 517 aaKnown RBP8.55□□□□□ -1.04
DSG3-201ENST00000257189 HEXIM2Q96MH2 286 aaKnown RBP8.55□□□□□ -1.04
DSG3-201ENST00000257189 UNC45AQ9H3U1 944 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 EFCAB1Q9HAE3 211 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 CRKP46108 304 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 BTKQ06187 659 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 AP3B2Q13367 1082 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 FAM47AQ5JRC9 791 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 SZRD1Q7Z422 152 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 SCUBE1Q8IWY4 988 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 GSPT2Q8IYD1 628 aaKnown RBP8.55□□□□□ -1.04
DSG3-201ENST00000257189 TMEM199Q8N511 208 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 SETD9Q8NE22 299 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 ENKURQ8TC29 256 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 DGCR14Q96DF8 476 aaKnown RBP8.55□□□□□ -1.04
DSG3-201ENST00000257189 CCDC126Q96EE4 140 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 RMND5BQ96G75 393 aaPredicted RBP8.55□□□□□ -1.04
DSG3-201ENST00000257189 FOPNLQ96NB1 174 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 CCDC28BQ9BUN5 200 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 KATNAL1Q9BW62 490 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 SERHL2Q9H4I8 314 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 TRIM39Q9HCM9 518 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 MLXIPLQ9NP71 852 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 SERHLQ9NQF3 203 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 ERAP1Q9NZ08 941 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 MYPNQ86TC9 1320 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 USP17L10C9JJH3 530 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 ABLIM1O14639 778 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 KIAA0391O15091 583 aaKnown RBP8.55□□□□□ -1.04
DSG3-201ENST00000257189 PEX5P50542 639 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 ATN1P54259 1190 aaPredicted RBP8.55□□□□□ -1.04
DSG3-201ENST00000257189 OASLQ15646 514 aaKnown RBP8.55□□□□□ -1.04
DSG3-201ENST00000257189 LRRC36Q1X8D7 754 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 SLC10A5Q5PT55 438 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 MZT2BQ6NZ67 158 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 WDR93Q6P2C0 686 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 SMYD4Q8IYR2 804 aaPredicted RBP8.55□□□□□ -1.04
DSG3-201ENST00000257189 OR8H2Q8N162 312 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 FAM81AQ8TBF8 368 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 E2F7Q96AV8 911 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 USP44Q9H0E7 712 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 RPF1Q9H9Y2 349 aaKnown RBP8.55□□□□□ -1.04
DSG3-201ENST00000257189 MYOZ2Q9NPC6 264 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 PARVAQ9NVD7 372 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 COMMD3-BMI1R4GMX3 469 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 SYNMO15061 1565 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 MYO1GB0I1T2 1018 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 FKBP9O95302 570 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 PTPN4P29074 926 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 MXD4Q14582 209 aaPredicted RBP8.55□□□□□ -1.04
DSG3-201ENST00000257189 PDZK1Q5T2W1 519 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 TTC27Q6P3X3 843 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 B3GNT6Q6ZMB0 384 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 FKBP9P1Q75LS8 142 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 G2E3Q7L622 706 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 GLIS2Q9BZE0 524 aaPredicted RBP8.55□□□□□ -1.04
DSG3-201ENST00000257189 NMRK2Q9NPI5 230 aa8.55□□□□□ -1.04
DSG3-201ENST00000257189 IARS2Q9NSE4 1012 aaKnown RBP8.55□□□□□ -1.04
DSG3-201ENST00000257189 SF3B1O75533 1304 aaKnown RBP eCLIP8.54□□□□□ -1.04
DSG3-201ENST00000257189 TMEM120BA0PK00 339 aa8.54□□□□□ -1.04
DSG3-201ENST00000257189 PGM3O95394 542 aa8.54□□□□□ -1.04
DSG3-201ENST00000257189 ATP6V1G2O95670 118 aa8.54□□□□□ -1.04
DSG3-201ENST00000257189 ATP1A1P05023 1023 aaKnown RBP8.54□□□□□ -1.04
DSG3-201ENST00000257189 NLRP10Q86W26 655 aa8.54□□□□□ -1.04
DSG3-201ENST00000257189 GUF1Q8N442 669 aaKnown RBP8.54□□□□□ -1.04
DSG3-201ENST00000257189 GANCQ8TET4 914 aa8.54□□□□□ -1.04
DSG3-201ENST00000257189 BTN2A2Q8WVV5 523 aa8.54□□□□□ -1.04
DSG3-201ENST00000257189 MIEF2Q96C03 454 aa8.54□□□□□ -1.04
DSG3-201ENST00000257189 LRRC1Q9BTT6 524 aa8.54□□□□□ -1.04
DSG3-201ENST00000257189 APOL6Q9BWW8 343 aa8.54□□□□□ -1.04
DSG3-201ENST00000257189 NGRNQ9NPE2 291 aaKnown RBP8.54□□□□□ -1.04
DSG3-201ENST00000257189 CACNA2D2Q9NY47 1150 aa8.54□□□□□ -1.04
DSG3-201ENST00000257189 WDR35Q9P2L0 1181 aa8.54□□□□□ -1.04
DSG3-201ENST00000257189 SEPT9Q9UHD8 586 aaPredicted RBP8.54□□□□□ -1.04
DSG3-201ENST00000257189 DIP2CQ9Y2E4 1556 aa8.54□□□□□ -1.04
DSG3-201ENST00000257189 A0A087WXM4 84 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms