RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 CPA2P48052 419 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 PDIA6Q15084 440 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 PKN3Q6P5Z2 889 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 SHCBP1Q8NEM2 672 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 MTMR12Q9C0I1 747 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 WWP1Q9H0M0 922 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 PDS5AQ29RF7 1337 aaKnown RBP19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 TBX3O15119 743 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 MED24O75448 989 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 ARP10275 920 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 RFX5P48382 616 aaPredicted RBP19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 PTRHD1Q6GMV3 140 aaKnown RBP19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 SH3TC2Q8TF17 1288 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 IGSF9BQ9UPX0 1349 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 KAT2BQ92831 832 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 TBX20Q9UMR3 447 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 PCDHB2Q9Y5E7 798 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 IQGAP3Q86VI3 1631 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 RNF17Q9BXT8 1623 aaKnown RBP19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 MDH1P40925 334 aaKnown RBP19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 RFC5P40937 340 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 MTHFD1LQ6UB35 978 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 ATG4AQ8WYN0 398 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 DOLKQ9UPQ8 538 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 USP42Q9H9J4 1324 aaKnown RBP19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 CHRM3P20309 590 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 KIF2BQ8N4N8 673 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 SCFD2Q8WU76 684 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 GPR63Q9BZJ6 419 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 PNMA8BQ9ULN7 279 aaPredicted RBP19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 SPHKAPQ2M3C7 1700 aa19.54■□□□□ 0.72
SMARCC1-201ENST00000254480 PPP1R3GB7ZBB8 358 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 RBP3P10745 1247 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 MIB1Q86YT6 1006 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 NUDT12Q9BQG2 462 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 TEX12Q9BXU0 123 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 GPATCH2LQ9NWQ4 482 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 TMEM161AQ9NX61 479 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 WDR35Q9P2L0 1181 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 OCA2Q04671 838 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 CBWD2Q8IUF1 395 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 NIF3L1Q9GZT8 377 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 DPP3Q9NY33 737 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 GPR75-ASB3A0A0A6YYF3 556 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 DMC1Q14565 340 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 ACOT1Q86TX2 421 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 LONP2Q86WA8 852 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 NOA1Q8NC60 698 aaKnown RBP19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 KDM4CQ9H3R0 1056 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 SLC39A10Q9ULF5 831 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 LOC100653049A0A140TA62 436 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 HBP1O60381 514 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 KRT34O76011 436 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 MAGEA4P43358 317 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 BTKQ06187 659 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 DDHD2O94830 711 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 EPHB2P29323 1055 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 CYP2C19P33261 490 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 TKFCQ3LXA3 575 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 PDLIM2Q96JY6 352 aa19.53■□□□□ 0.72
SMARCC1-201ENST00000254480 ZBTB39O15060 712 aa19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 ANO5Q75V66 913 aa19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 AGPAT3Q9NRZ7 376 aa19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 PSMC3IPQ9P2W1 217 aaPredicted RBP19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 PNPLA6Q8IY17 1366 aa19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 TARSL2A2RTX5 802 aaKnown RBP19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 M0QYT0 321 aa19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 AKAP10O43572 662 aa19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 ACO1P21399 889 aaKnown RBP19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 NOTUMQ6P988 496 aa19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 MDM1Q8TC05 714 aa19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 ZNF473Q8WTR7 871 aaKnown RBP19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 ZNF669Q96BR6 464 aaPredicted RBP19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 KIAA0391O15091 583 aaKnown RBP19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 SPTLC1O15269 473 aa19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 IL18RAPO95256 599 aa19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 MYL2P10916 166 aa19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 FEZF2Q8TBJ5 459 aa19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 SCFD1Q8WVM8 642 aa19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 CDC42BPAQ5VT25 1732 aa19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 SSU72P8A0A1W2PR75 194 aa19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 ITIH2P19823 946 aa19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 YY1AP1Q9H869 796 aa19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 DUSP10Q9Y6W6 482 aa19.52■□□□□ 0.72
SMARCC1-201ENST00000254480 IL10P22301 178 aa19.52■□□□□ 0.71
SMARCC1-201ENST00000254480 GRAMD4Q6IC98 578 aa19.52■□□□□ 0.71
SMARCC1-201ENST00000254480 LVRNQ6Q4G3 990 aa19.52■□□□□ 0.71
SMARCC1-201ENST00000254480 DENND5BQ6ZUT9 1274 aa19.52■□□□□ 0.71
SMARCC1-201ENST00000254480 TXNRD3Q86VQ6 643 aa19.52■□□□□ 0.71
SMARCC1-201ENST00000254480 ABHD8Q96I13 439 aa19.52■□□□□ 0.71
SMARCC1-201ENST00000254480 SMAD5Q99717 465 aaKnown RBP19.52■□□□□ 0.71
SMARCC1-201ENST00000254480 PYGLP06737 847 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 CETPP11597 493 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 ALDH1A3P47895 512 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 ATN1P54259 1190 aaPredicted RBP19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 PRMT7Q9NVM4 692 aaPredicted RBP19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 FAM200BP0CF97 657 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 CD44P16070 742 aaKnown RBP19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 EPB42P16452 691 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms