RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 TEX33O43247 280 aa15.1■□□□□ 0.01
VPS25-201ENST00000253794 FXR1P51114 621 aaKnown RBP eCLIP15.1■□□□□ 0.01
VPS25-201ENST00000253794 UBASH3AP57075 661 aa15.1■□□□□ 0.01
VPS25-201ENST00000253794 YWHAHQ04917 246 aaPredicted RBP15.1■□□□□ 0.01
VPS25-201ENST00000253794 PTPROQ16827 1216 aa15.1■□□□□ 0.01
VPS25-201ENST00000253794 OVOS1Q6IE37 1185 aa15.1■□□□□ 0.01
VPS25-201ENST00000253794 ZNF280DQ6N043 979 aa15.1■□□□□ 0.01
VPS25-201ENST00000253794 ENOSF1Q7L5Y1 443 aa15.1■□□□□ 0.01
VPS25-201ENST00000253794 TMC7Q7Z402 723 aa15.1■□□□□ 0.01
VPS25-201ENST00000253794 METTL23Q86XA0 190 aa15.1■□□□□ 0.01
VPS25-201ENST00000253794 RIN2Q8WYP3 895 aaPredicted RBP15.1■□□□□ 0.01
VPS25-201ENST00000253794 B3GALT6Q96L58 329 aa15.1■□□□□ 0.01
VPS25-201ENST00000253794 MMS19Q96T76 1030 aa15.1■□□□□ 0.01
VPS25-201ENST00000253794 RTP3Q9BQQ7 232 aa15.1■□□□□ 0.01
VPS25-201ENST00000253794 NAA15Q9BXJ9 866 aaKnown RBP15.1■□□□□ 0.01
VPS25-201ENST00000253794 SDCBP2Q9H190 292 aa15.1■□□□□ 0.01
VPS25-201ENST00000253794 SMYD3Q9H7B4 428 aa15.1■□□□□ 0.01
VPS25-201ENST00000253794 C2orf71A6NGG8 1288 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 OR6C75A6NL08 312 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 CBFA2T2O43439 604 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 NOL4O94818 638 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 TPM3P06753 285 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 ACO1P21399 889 aaKnown RBP15.09■□□□□ 0.01
VPS25-201ENST00000253794 IRS1P35568 1242 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 SYCP1Q15431 976 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 PSMD5Q16401 504 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 KLHDC7AQ5VTJ3 777 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 KIAA1841Q6NSI8 718 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 UNC93AQ86WB7 457 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 OSTM1Q86WC4 334 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 ARHGEF19Q8IW93 802 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 ELMO3Q96BJ8 720 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 ACBD6Q9BR61 282 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 MRPL45Q9BRJ2 306 aaKnown RBP15.09■□□□□ 0.01
VPS25-201ENST00000253794 GANQ9H2C0 597 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 PRDM12Q9H4Q4 367 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 ENTPD7Q9NQZ7 604 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 IFNKQ9P0W0 207 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 BARX2Q9UMQ3 279 aaPredicted RBP15.09■□□□□ 0.01
VPS25-201ENST00000253794 CNTN6Q9UQ52 1028 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 STXBP5LQ9Y2K9 1186 aa15.09■□□□□ 0.01
VPS25-201ENST00000253794 TIMM13Q9Y5L4 95 aaPredicted RBP15.09■□□□□ 0.01
VPS25-201ENST00000253794 HIDE1A8MVS5 230 aa15.08■□□□□ 0
VPS25-201ENST00000253794 RFXAPO00287 272 aa15.08■□□□□ 0
VPS25-201ENST00000253794 AP5Z1O43299 807 aa15.08■□□□□ 0
VPS25-201ENST00000253794 CILPO75339 1184 aa15.08■□□□□ 0
VPS25-201ENST00000253794 CXCL14O95715 111 aa15.08■□□□□ 0
VPS25-201ENST00000253794 PCSK1P29120 753 aa15.08■□□□□ 0
VPS25-201ENST00000253794 NDUFV1P49821 464 aa15.08■□□□□ 0
VPS25-201ENST00000253794 YWHAEP62258 255 aaKnown RBP15.08■□□□□ 0
VPS25-201ENST00000253794 FIGNQ5HY92 759 aa15.08■□□□□ 0
VPS25-201ENST00000253794 PRSS55Q6UWB4 352 aaPredicted RBP15.08■□□□□ 0
VPS25-201ENST00000253794 CEP57Q86XR8 500 aa15.08■□□□□ 0
VPS25-201ENST00000253794 THEM5Q8N1Q8 247 aa15.08■□□□□ 0
VPS25-201ENST00000253794 PPM1KQ8N3J5 372 aa15.08■□□□□ 0
VPS25-201ENST00000253794 KREMEN1Q96MU8 473 aa15.08■□□□□ 0
VPS25-201ENST00000253794 PKMYT1Q99640 499 aa15.08■□□□□ 0
VPS25-201ENST00000253794 ARID3AQ99856 593 aa15.08■□□□□ 0
VPS25-201ENST00000253794 CLSTN3Q9BQT9 956 aa15.08■□□□□ 0
VPS25-201ENST00000253794 LSM14BQ9BX40 385 aaKnown RBP15.08■□□□□ 0
VPS25-201ENST00000253794 XPO4Q9C0E2 1151 aaKnown RBP15.08■□□□□ 0
VPS25-201ENST00000253794 CISHQ9NSE2 258 aa15.08■□□□□ 0
VPS25-201ENST00000253794 NME7Q9Y5B8 376 aa15.08■□□□□ 0
VPS25-201ENST00000253794 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.07■□□□□ 0
VPS25-201ENST00000253794 FSD2A1L4K1 749 aa15.07■□□□□ 0
VPS25-201ENST00000253794 CNPP09543 421 aaKnown RBP15.07■□□□□ 0
VPS25-201ENST00000253794 WEE2P0C1S8 567 aa15.07■□□□□ 0
VPS25-201ENST00000253794 UCHL3P15374 230 aa15.07■□□□□ 0
VPS25-201ENST00000253794 GNL1P36915 607 aaPredicted RBP15.07■□□□□ 0
VPS25-201ENST00000253794 ZNF132P52740 706 aa15.07■□□□□ 0
VPS25-201ENST00000253794 MFAP3P55082 362 aa15.07■□□□□ 0
VPS25-201ENST00000253794 CDH8P55286 799 aa15.07■□□□□ 0
VPS25-201ENST00000253794 LRMPQ12912 555 aa15.07■□□□□ 0
VPS25-201ENST00000253794 RAB33AQ14088 237 aa15.07■□□□□ 0
VPS25-201ENST00000253794 ADGRE1Q14246 886 aa15.07■□□□□ 0
VPS25-201ENST00000253794 CTXN3Q4LDR2 81 aa15.07■□□□□ 0
VPS25-201ENST00000253794 PLPP4Q5VZY2 271 aa15.07■□□□□ 0
VPS25-201ENST00000253794 RSPO2Q6UXX9 243 aaPredicted RBP15.07■□□□□ 0
VPS25-201ENST00000253794 SCARA5Q6ZMJ2 495 aa15.07■□□□□ 0
VPS25-201ENST00000253794 CRYBG2Q8N1P7 616 aa15.07■□□□□ 0
VPS25-201ENST00000253794 OR10T2Q8NGX3 314 aa15.07■□□□□ 0
VPS25-201ENST00000253794 WHAMMQ8TF30 809 aa15.07■□□□□ 0
VPS25-201ENST00000253794 AUTS2Q8WXX7 1259 aa15.07■□□□□ 0
VPS25-201ENST00000253794 SHC3Q92529 594 aa15.07■□□□□ 0
VPS25-201ENST00000253794 IQCDQ96DY2 449 aa15.07■□□□□ 0
VPS25-201ENST00000253794 KLHL5Q96PQ7 755 aa15.07■□□□□ 0
VPS25-201ENST00000253794 CDCA3Q99618 268 aaPredicted RBP15.07■□□□□ 0
VPS25-201ENST00000253794 EMILIN2Q9BXX0 1053 aa15.07■□□□□ 0
VPS25-201ENST00000253794 TTYH3Q9C0H2 523 aa15.07■□□□□ 0
VPS25-201ENST00000253794 ZCWPW1Q9H0M4 648 aa15.07■□□□□ 0
VPS25-201ENST00000253794 DDX43Q9NXZ2 648 aaKnown RBP15.07■□□□□ 0
VPS25-201ENST00000253794 CDH9Q9ULB4 789 aa15.07■□□□□ 0
VPS25-201ENST00000253794 MAFFQ9ULX9 164 aa15.07■□□□□ 0
VPS25-201ENST00000253794 MTCH2Q9Y6C9 303 aa15.07■□□□□ 0
VPS25-201ENST00000253794 ITIH6Q6UXX5 1313 aa15.07■□□□□ 0
VPS25-201ENST00000253794 ATG2AQ2TAZ0 1938 aa15.07■□□□□ 0
VPS25-201ENST00000253794 TEX28O15482 410 aa15.06■□□□□ 0
VPS25-201ENST00000253794 ABLIM3O94929 683 aa15.06■□□□□ 0
VPS25-201ENST00000253794 RAP1GAPP47736 663 aa15.06■□□□□ 0
VPS25-201ENST00000253794 KLK7P49862 253 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms